Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 seq15 96.9 4e-15 seq14 96.9 4e-15 seq12 96.9 4e-15 >seq1 Length=1352724 Score = 134 bits (148), Expect = 2e-26 Identities = 311/464 (67%), Gaps = 5/464 (1%) Strand=Plus/Plus Query 116812 GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCAC 116871 |||||||| | ||| || || ||||| || | |||| | ||| || | ||||||| Sbjct 25920 GCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAGTGCCAC 25979 Query 116872 GGTTCCAGGTACACCGCGATTGACCCCTTGCGACGACCA--GCCT-GGTTTACATACCTC 116928 ||||| ||||| | || | | |||||||| ||| |||| ||| || |||||| Sbjct 25980 GGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACGTACCTC 26039 Query 116929 GCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCC 116988 ||||| |||| || ||||||||||| ||||||||||| | || || ||||| || Sbjct 26040 GCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGAGGTACCGTTTGTGCCT 26099 Query 116989 CGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCAC 117048 | ||| ||| |||| | || ||||| || || ||||||||| || || || Sbjct 26100 CTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAAACCAATACCGCCGGCGGAC 26159 Query 117049 TTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTA 117108 || || || ||||| ||| | | || ||||||| || || || ||||| |||| Sbjct 26160 TTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCTTCCTTC 26219 Query 117109 TTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTT 117168 | || | ||||| || | ||| || | || ||||| |||||||| | |||| Sbjct 26220 ATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGTACCGGCGTTGAACAAGGTT 26279 Query 117169 GGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCA-AGACAGAGGG 117227 || | ||||||| | | | || || |||| | | | || || || | || | | Sbjct 26280 GGCGACGCGTGGGTCATCCAACGTTCAGACAACATGTGATACGTATCAACAGCCTTTTCG 26339 Query 117228 AATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 || || | | ||| |||||||| || || | ||| ||||||| Sbjct 26340 -ATATCCTTCTTGTGGATACCGATGGATACTCTCATCAACATGT 26382 >seq15 Length=989707 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/204 (71%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 12867 CGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT---TGATT-TTC 12922 || ||| |||||| ||||| |||||||| || ||||| ||||||||| || || ||| Sbjct 2579 CGCTGCGAACCGACCGCGTCGATTTCGTCGATAAAAACAATACACGGTGCTTGCTTCTTC 2520 Query 12923 ACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCAC 12982 | | ||| ||| | |||||||||| || ||||| || |||||||||||| | Sbjct 2519 GCCG----CTTTAAATAGTTCTCGCACTCGTCGAGCGCCGACGCCAACAAACATCTCCTC 2464 Query 12983 AAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGC 13042 ||| | | | ||||| | | ||| || |||| | ||| ||||||| |||| || Sbjct 2463 AAACTCAGAGCCGGAAACGTAAAAGAACGGCACGTCCGCTTCGCCCGCGACGGCTTTCGC 2404 Query 13043 GAGGAGGGTCTTCCCCGTCCCTGG 13066 ||| | ||||| || ||||| || Sbjct 2403 GAGCAAAGTCTTTCCTGTCCCCGG 2380 >seq14 Length=1037991 Score = 96.9 bits (106), Expect = 4e-15 Identities = 298/453 (66%), Gaps = 6/453 (1%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCAT-CGAGGCTGATATTCTCCA 127289 ||| || ||||| || ||||| |||||||| ||||| || | | | | || | |||| Sbjct 65898 GTACTCGCCGACACGTTTCTCAAAGAAGTTCGTCTTGCCTTGCAAAGAAATTAAT-TCCA 65956 Query 127290 TAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGA 127348 | | || || |||||| | || | | | || ||| || | ||| ||| | Sbjct 65957 TCCAGTCGAACGGGTTCGCGGTGT-CGTACTCCTTCGCAAAGCCGAGCTGCGAGAGCAAG 66015 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 |||| | |||||||| ||||| || |||| | || | |||||| |||| ||| Sbjct 66016 TGATCGGCAACGTACTCGATGTAATCTCTCATCATGTCGGCGTTCATGCCGACGAGCGCG 66075 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || | |||||| | | ||| |||||||||| || || || || || || Sbjct 66076 CACGGCAACGCGTCGCACACAAACTCCTTCTCAATTTCAACCGCCTCGGTAACAATCTTT 66135 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTC-CACAGCAAACTC 127527 | | ||| | || || | ||| || || || | || ||| ||||| || Sbjct 66136 CTCAACTTCTCCTCGCCCGGCGTGTTGTTCAACATCGTGTAAAGCAAGCAC-GCAAAATC 66194 Query 127528 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 127587 | ||| | ||| ||||| | |||||| | || || |||||| || || ||||| | Sbjct 66195 TCTGTGCAAACCTTCGTCTCTGGAGATCAACTCGTTGGAGAAGGTGAGCCCCGGCATCAT 66254 Query 127588 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647 || | |||||| | |||| | || | || || ||||| ||||||||||| || || || Sbjct 66255 GCCTCTCTTCTTGAGCCAGTAGATTGAGCAGAAAGAGCCGGAGAAGAAGATGCCTTCGAC 66314 Query 127648 ACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 || |||||||| | | ||| ||||| ||||| Sbjct 66315 GCAGGCGAACGCGACCAAACGTTCGGCGAAGGA 66347 >seq12 Length=1122692 Score = 96.9 bits (106), Expect = 4e-15 Identities = 264/395 (67%), Gaps = 22/395 (6%) Strand=Plus/Plus Query 176641 ACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCG 176700 ||| || ||||| |||||||||| ||| ||||||||| ||||| | | || || || Sbjct 1064868 ACCTTTGATGTGCGAACCATCGTGATCTTGATCCGTCATGATCATCAACTTCCCGTATCG 1064927 Query 176701 AAGC-TC-----GGAAACATCTTGATAATCCTTACCTTGTTGAAGACCCAAAATCTTCTT 176754 | | || |||| | || | || || || ||||| | |||||||||| || Sbjct 1064928 CAACGTCTTGATGGAATCTTCGTCGTACGTTTTGCCGTGTTGCAAGCCCAAAATCTGTTT 1064987 Query 176755 GAGATCATTGAACTC----TTGGTTTGATGTGAGTTGCGCCACTGAAGCGTCGCGGACAT 176810 || | ||| || ||| | | | | ||| | | ||||||||||| || | Sbjct 1064988 GATGTGGGTGATTTCCACATTGTTCT----TTACTTGATCAAACGAAGCGTCGCGAACGT 1065043 Query 176811 TTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGAC 176870 | ||||||| | | || ||||| ||||||| || | || || | || | || Sbjct 1065044 TCAATAACTTCCCTCTCAACGGAAACACCCCGTAGTTGTCTCTTCCGACGATGGACAAAC 1065103 Query 176871 CAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA--CTTTCC 176928 | | ||| || | | || || ||||| ||||| || | || ||||| || ||||| Sbjct 1065104 CGGAAACCGCCAACGCTTTGGCAGAATCCCCCTCGGTTAAAATCAGCGTGCAGTCTTTCG 1065163 Query 176929 AGATTGTG-CCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGG 176987 || ||| | ||| || || |||||||||||||||||||| ||||||||||| | | | Sbjct 1065164 AG-TTGCGTCCG--CCGGCGTTGTTCGCATCGTCCAACTTCGGAATACCAGTCA-ATCGC 1065219 Query 176988 ACTTACGAG-CACCATCTGTCTTCTTGAGTTCCTT 177021 | | | | ||||||| |||||||| | ||||| Sbjct 1065220 AATCGCTTGACACCATCGGTCTTCTTCAAGTCCTT 1065254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507038954360