Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq16 111 4e-19 seq7 105 2e-17 seq17 89.7 1e-12 seq12 89.7 1e-12 >seq16 Length=955652 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || |||||||| |||| |||||| || ||||| || || || ||||| | |||||| ||| Sbjct 707316 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707375 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||| || | |||||||| ||||| || ||||| || || ||||| ||| Sbjct 707376 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707435 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| |||||| | | || || ||||||||||| || || || || | ||| Sbjct 707436 ACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707495 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 707496 TTGACGAAGATTTG 707509 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || |||||||| |||| |||||| || ||||| || || || ||||| | |||||| ||| Sbjct 707544 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707603 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||| || | |||||||| ||||| || ||||| || || ||||| ||| Sbjct 707604 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707663 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| |||||| | | || || ||||||||||| || || || || | ||| Sbjct 707664 ACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707723 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 707724 TTGACGAAGATTTG 707737 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || |||||||| |||| |||||| || ||||| || || || ||||| | |||||| ||| Sbjct 707772 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707831 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||| || | |||||||| ||||| || ||||| || || ||||| ||| Sbjct 707832 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707891 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| |||||| | | || || ||||||||||| || || || || | ||| Sbjct 707892 ACGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707951 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 707952 TTGACGAAGATTTG 707965 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||| |||||||| ||||| || || || ||||||||||||||| ||||||| Sbjct 707383 ATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAACATCCAGAAG 707324 Query 200998 GAGTCTACTCTTCACCTTGTTTTG 201021 |||||||| | ||| | || ||| Sbjct 707323 GAGTCTACGTTGCACTTGGTGTTG 707300 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||| |||||||| ||||| || || || ||||||||||||||| ||||||| Sbjct 707611 ATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAACATCCAGAAG 707552 Query 200998 GAGTCTACTCTTCACCTTGTTTTG 201021 |||||||| | ||| | || ||| Sbjct 707551 GAGTCTACGTTGCACTTGGTGTTG 707528 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||| |||||||| ||||| || || || ||||||||||||||| ||||||| Sbjct 707839 ATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAACATCCAGAAG 707780 Query 200998 GAGTCTACTCTTCACCTTGTTTTG 201021 |||||||| | ||| | || ||| Sbjct 707779 GAGTCTACGTTGCACTTGGTGTTG 707756 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||| |||||||| ||||| || || || ||||||||||||||| ||||||| Sbjct 708067 ATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAACATCCAGAAG 708008 Query 200998 GAGTCTACTCTTCACCTTGTTTTG 201021 |||||||| | ||| | || ||| Sbjct 708007 GAGTCTACGTTGCACTTGGTGTTG 707984 >seq7 Length=519835 Score = 105 bits (116), Expect = 2e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || ||||| ||||| | ||| || || |||||||| | ||| ||||| | ||| || ||| Sbjct 260389 GTGGACTCTTTTTGAATGTTATAATCCGCCAAAGTGCGTCCGTCTTCTAACTGTTTCCCG 260448 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | ||||||||||| ||| || ||||| || || || || ||| Sbjct 260449 GCGAAGATCAACCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATTTTCGCCTTG 260508 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| |||| |||||| | | ||| || ||||| |||||||| || ||||| Sbjct 260509 ACGTTGTCGATGGTGTCCGAGGATTCCACTTCCAAGGTGATCGTTTTGCCCGT 260561 >seq17 Length=937610 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 || ||| | ||| | || || || ||||| | ||| ||||| || ||||| | ||||| Sbjct 351339 CAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGCTAAAGTTCGGCCATC 351398 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| | || |||||||||||||| | |||||||| ||||| || || ||| || Sbjct 351399 TTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCGGGATGCCCTCTTTGTC 351458 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || || || ||| ||| |||| ||||| | | || || || | |||||||| Sbjct 351459 TTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCGACTTCGAGGGTGATCGT 351518 Query 199597 CTTACCCGTGAG 199608 ||| |||||||| Sbjct 351519 CTTGCCCGTGAG 351530 >seq12 Length=1122692 Score = 89.7 bits (98), Expect = 1e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || || ||||||| |||||| || || | ||| || || ||||| | ||| || ||| Sbjct 916972 GTTGATTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCTAACTGTTTACCG 917031 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TT 199551 ||||| || | |||||||||||||| ||| || || || ||||| ||| || || Sbjct 917032 GCGAAAATCAATCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCTTGAAT-TTTCGCTTT 917090 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 |||| |||| ||||| | | || || || | |||||| || || || || | ||| Sbjct 917091 CACGTTGTCGATCGTGTCCGAGGACTCGACTTCGAGCGTGATGGTTTTCCCAGTCAAAGT 917150 Query 199612 TTT 199614 ||| Sbjct 917151 TTT 917153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921282796407