Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6 208 3e-48 seq7 116 1e-20 seq12 96.9 1e-14 >seq6 Length=663424 Score = 208 bits (230), Expect = 3e-48 Identities = 413/603 (68%), Gaps = 15/603 (2%) Strand=Plus/Minus Query 451880 AGTAAAGATAAAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATT 451939 || |||| | |||| ||||||||||| | || || || || ||| |||| || ||| || Sbjct 466006 AGAAAAG-TCAAATCGATGAAATTGTTTTAGTTGGTGGCTCGACAAGAATCCCCAAAGTT 465948 Query 451940 CAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGAT 451999 || || ||||| || |||| || || ||| | ||| | || || || ||| Sbjct 465947 CAGGAACTGTTGAAAGAGTACTTTGATGGCAAGGAACCGAGCAAGGGAGTGAACCCAGAT 465888 Query 452000 GAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGA- 452058 |||||||||||||||||||||||||| |||| | ||| || | || || | ||| Sbjct 465887 GAAGCTGTTGCATATGGTGCTGCAGTCCAAGGCGGGATTTTATCTGGCGAAGGGGGTGAT 465828 Query 452059 -AAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAG 452117 ||| |||| ||| || | | |||||| ||||||| | | || ||||||||| Sbjct 465827 GAAACGAAGGACATA--CTTCTCCTTGATGTAGCACCTCTGACACAAGGTATTGAAACAG 465770 Query 452118 CTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTC 452177 |||||| | ||||| || || || ||| ||| || || ||||| || Sbjct 465769 TTGGTGGCGTTATGACGAAGTTGATCCCACGTAATACTGTCATACCGACAAAAAAATCTC 465710 Query 452178 AAACATTTAGTACAG--CAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGG 452235 |||| |||| ||| |||| |||| || | | ||| | || || || ||||| || Sbjct 465709 AAACTTTTACAACATATCAAG--ATAATCAGCAAACTGTGATGATACAGGTTTTTGAGGG 465652 Query 452236 AGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTCTT-TCAAACAT 452292 ||| | || ||||| |||||| || ||| || ||||| |||| |||| | Sbjct 465651 TGAAAGAGCCATGACCAAGGATAATCATTTACTTGGTAAATTTGAACTCACGTCAA---T 465595 Query 452293 TCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGG 452352 ||| ||| || ||||| ||| ||||| || |||| | ||| ||||||| ||||| Sbjct 465594 TCCCCCTGCACCCAGGGGTGTTCCACAAATCGAGGTTACGTTTGAAATTGATGCGAATGG 465535 Query 452353 TATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTAC 452412 ||||||||||| |||| | || ||| | |||| |||||||| |||||||| || || Sbjct 465534 GATTCTTAATGTCGGTGCGGAAGATAAAGGAACTGGTAAATCAGAGAAAATTACTATAAC 465475 Query 452413 TAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAA 452472 || |||||| | | ||| ||||||| |||||| ||||| || ||||| ||| | Sbjct 465474 AAACGATAAAGGGAGACTTTCTCAAGAAGAAATTGAACGTATGGTCGAAGAAGCTGAAGA 465415 Query 452473 ATT 452475 ||| Sbjct 465414 ATT 465412 Score = 114 bits (126), Expect = 5e-20 Identities = 179/253 (71%), Gaps = 11/253 (4%) Strand=Plus/Minus Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG-ACATATTGCTGGTTT 451398 || ||||||||||||||||| || |||||||| |||||||| || ||| || || || | Sbjct 466594 GCATATTTCAATGATGCACAGCGTCAAGCAACAAAAGATGCGGGGACA-ATCGCGGGACT 466536 Query 451399 AAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAA 451458 || ||| ||||||| ||||||||||| || || || | || ||||| || Sbjct 466535 CAACGTTGCAAGAATTATCAATGAACCTACTGCGGCGGCCATCGCCTATGGTCT------ 466482 Query 451459 ATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 | | ||||| || || || |||||| | || ||||| |||||||||| || || Sbjct 466481 -TGACAAGAA--AGGCGAGAAGAATATTCTTGTTTTTGACCTTGGTGGAGGCACATTCGA 466425 Query 451519 TACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATAC 451578 | ||| | | | ||||| | || ||||||||||| | |||| ||||| ||||| Sbjct 466424 TGTTTCCATTTTAACTATTGATAACGGTGTATTTGAAGTTATTTCAACAAATGGAGATAC 466365 Query 451579 TCATCTAGGAGGT 451591 || || || ||| Sbjct 466364 GCACCTCGGGGGT 466352 >seq7 Length=519835 Score = 116 bits (128), Expect = 1e-20 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTA-AAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAA 391114 || ||| ||| ||| | |||| || ||||| || || | || || ||||| || || | Sbjct 260580 ATGTTCTTTATAAAAAGTGACGGGCAAAACGATCACCTTGGAAGTGGAATCCTCGGACAC 260521 Query 391115 CATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG 391174 ||| || | || ||||| ||||| |||||||| || |||||||| || || || Sbjct 260520 CATCGACAACGTCAAGGCGAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGCG 260461 Query 391175 TTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGA 391234 || || ||| | |||||||| | ||||| ||| | ||||||||||||||||| ||| | Sbjct 260460 GTTGATCTTCGCCGGGAAACAGTTAGAAGACGGACGCACTTTGGCGGATTATAACATTCA 260401 Query 391235 TAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || || | || | ||||| || ||| | |||||||| Sbjct 260400 AAAAGAGTCCACGTTACACTTGGTGTTACGCCTGAGAGG 260362 >seq12 Length=1122692 Score = 96.9 bits (106), Expect = 1e-14 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 391064 TAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGC 391123 |||||| ||||||| ||||| || || || || || || || || || | || || Sbjct 917154 TAAAACTTTGACTGGGAAAACCATCACGCTCGAAGTCGAGTCCTCGGACACGATCGACAA 917095 Query 391124 TATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTT 391183 | ||| ||||||||||| ||||| || ||||| || || || || || || ||||| Sbjct 917094 CGTGAAAGCGAAAATTCAAGACAAGGAGGGCATTCCGCCGGACCAGCAGCGATTGATTTT 917035 Query 391184 CTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGC 391243 | | || ||||| | ||||| || |||||| | |||||||| || || | || || | Sbjct 917034 CGCCGGTAAACAGTTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAATC 916975 Query 391244 AACACTTCACTTAGTATT 391261 ||| | ||||| || || Sbjct 916974 AACCTTGCACTTGGTGTT 916957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717868408268