Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq6 140 2e-27 seq15 125 5e-23 >seq6 Length=663424 Score = 140 bits (154), Expect = 2e-27 Identities = 156/207 (75%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| ||| || || || | ||||||||| || | | |||| ||| ||| || Sbjct 519843 ACATCAAAGGTACCTCCTCCGAGATCAAAAAT---TAAAATGGTTTCATTGGCTT---TT 519896 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 | |||| |||||| |||| | ||||||||| |||||||| || || | |||||||| | Sbjct 519897 CTCTCAAAACCATATGCAAGCGAAGCAGCAGTCGGTTCATTGATGATACGCAAAACATCA 519956 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||||||||| || |||||||| ||||||||||| || |||||| ||||| ||| Sbjct 519957 ATACCAGCAATCTGCCCGGCATCTTTTGTGGCTTGTCTCTGACTATCGTTGAAATACGCA 520016 Query 518288 GGAACAGTAATAACGGCATCAGTTACT 518314 ||||| ||||| || || | ||| ||| Sbjct 520017 GGAACTGTAATCACAGCCTTAGTCACT 520043 Score = 131 bits (144), Expect = 1e-24 Identities = 330/498 (66%), Gaps = 8/498 (2%) Strand=Plus/Plus Query 517148 TCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCG 517207 ||| ||||||||| ||||||| | ||| | ||||||| |||| ||| | ||| || Sbjct 465406 TCTGCAAATTCTTCAGCTTCTTCGACCATACGTTCAATTTCTTCTTGAGAAAGTCTCCCT 465465 Query 517208 CGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACA 517267 || || || |||||||| |||| ||||| ||| |||||| | ||| ||| Sbjct 465466 TTATCGTTTGTTATAGTAATTTTCTCTGATTTACCAGTTCCTTTATCTTCCGCACCGACA 465525 Query 517268 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 517327 |||||||| ||||| ||||| | ||||| || || || ||||| || || || || | Sbjct 465526 TTAAGAATCCCATTCGCATCAATTTCAAACGTAACCTCGATTTGTGGAACACCCCTGGGT 465585 Query 517328 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 517387 ||||| || || | | |||| | || || || |||||| || || | | Sbjct 465586 GCAGGGGGAATTGACGTGAGTTCAAATTTACCAAGTAAATGATTATCCTTGGTCATGGCT 465645 Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTA 517444 | ||||||||| |||| || | | | |||||| ||||||||| ||| |||||| Sbjct 465646 CTTTCACCCTCAAAAACCTGTA---TCATCACAGTTTGCTGATTATCTTGATATGTTGTA 465702 Query 517445 AATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 || | | || |||||||| || || || || | || | || ||||||| Sbjct 465703 AA-AGTTTGAGATTTTTTTGTCGGTATGACAGTATTACGTGGGATCAACTTCGTCATAAC 465761 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||||| ||||||| | ||| | | ||||| | ||||||| || | || | | Sbjct 465762 GCCACCAACTGTTTCAATACCTTGTGTCAGAGGTGCTACATCAAGGAGAAGTATGTCCTT 465821 Query 517564 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 || ||| | || ||| | ||| | |||| | ||||||||||||||||| Sbjct 465822 CGTTTCATCACCCCCTTCGCCAGATAAAATCCCGCCTTGGACTGCAGCACCATATGCAAC 465881 Query 517624 AGCTTCATCAGGATTAAC 517641 ||||||||| || || || Sbjct 465882 AGCTTCATCTGGGTTCAC 465899 Score = 116 bits (128), Expect = 3e-20 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 518500 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559 ||| ||||| |||| ||| || ||||||| || |||||||| | ||||||| Sbjct 466926 TCTCCCAATCAATCTTTTAGCGTCAAAAACGGTTCGTGTTGGATTGGAGGTGGCTTGATT 466985 Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 ||| || |||||||| |||||| | || || || ||||||| ||| || |||||||| | Sbjct 466986 TTTTGCAGCATCTCCGATCAGACGCTCAGTATCCGTAAATGCAACGTAAGATGGAGTAAT 467045 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATT 518661 | ||| ||||| ||||| ||||| ||||||||||| || || Sbjct 467046 CCTATTGCCTTGGTCATTTGCAATTATTTCAACTTTCCCGTT 467087 Score = 102 bits (112), Expect = 6e-16 Identities = 192/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 517270 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 517329 |||||| ||||| ||||| | ||| || |||||||||| || || || || | |||| Sbjct 519008 AAGAATTCCATTCGCATCTATATCGAACTTGACTTCAATCTGCGGAACTCCACGGGGAGC 519067 Query 517330 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 517389 | ||| || || |||||| ||| | || ||| | ||||||||||| || | || Sbjct 519068 GGATGGTATTCCATCCAAACGAAAGTTGCCAAGACTTTTATTATCTTTCACAAACTCTCT 519127 Query 517390 TTCACCCTCGAAAATTTGGATAGTAACTACA---GTTTGATTATCTGAATAAGTTGTAAA 517446 |||||| | |||| | || | ||||| ||||| ||| | | || | || Sbjct 519128 TTCACCTTGCAAAA---CGTTAATTTCTACACTGGTTTGGCCATCAGCAGCGGTGGAGAA 519184 Query 517447 TACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 517506 ||| ||||| | ||| | ||||||||||| | ||| | || ||||||| ||| Sbjct 519185 AACTTCAGATTTCGAAGTAGGTAATGTTGTGTTTCGAGGAATGAGCTTCGTCATAACACC 519244 Query 517507 ACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547 || |||||| | ||||| ||||| |||||||| |||| Sbjct 519245 CCCAAGTGTTTCAAGTCCAAGTGAAAGCGGAGTGACGTCAA 519285 Score = 96.9 bits (106), Expect = 3e-14 Identities = 124/170 (73%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || || ||||| | ||||||| ||| | |||| | || | ||| | || |||||| Sbjct 466431 GTGCCTCCACCAAGGTCAAAAACAAGAATATTCTTCTC---GCCTT---TCTTGTCAAGA 466484 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| || | || || ||||| |||||||| |||||||| ||| || || || || Sbjct 466485 CCATAGGCGATGGCCGCCGCAGTAGGTTCATTGATAATTCTTGCAACGTTGAGTCCCGCG 466544 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 ||| | || |||||||| || ||||| | |||| ||| || |||||||| Sbjct 466545 ATTGTCCCCGCATCTTTTGTTGCTTGACGCTGTGCATCATTGAAATATGC 466594 >seq15 Length=989707 Score = 125 bits (138), Expect = 5e-23 Identities = 737/1167 (63%), Gaps = 44/1167 (4%) Strand=Plus/Minus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 |||||| | |||||| || || | || | || |||||||| | || || || Sbjct 626478 GCTTCTTGGACCATTCTTTCGATGTCTTCCTTGGACAATCTTCCCTTGTCGTTGGTGATG 626419 Query 517223 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 517282 ||||| || || || | || || ||||| | |||| ||| || | ||||| || Sbjct 626418 GTAATCTTATTCTTTTGGCCGGTGGACTTATCTTCCGCAGACACGTTCAAGATACCGTTC 626359 Query 517283 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 517342 || || | || || ||| | ||||| ||||| |||||| | || || ||||| ||| Sbjct 626358 GCGTCGATGTCGAAGCAGACGTTGATTTGCGGGACGCCTCTCGGCGCCGGCGGGATGCCT 626299 Query 517343 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT----GAATTTTCGTTCACCCTC 517398 | ||| | |||| | |||| || || ||| | || ||| ||||| || || Sbjct 626298 TGCAATTCAAATTTACCCAACAAGTTGTTGTCTCTCGTTCGCGAA----CGTTCGCCTTC 626243 Query 517399 GAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTT 517458 ||||| |||||| || | | || || || ||||| || | || ||| ||| Sbjct 626242 GAAAACTTGGATCAACACGCCCGGCTGGTTGTCAGAATACGTGGAGAACACTTGTTCTTT 626183 Query 517459 TTTACAAGGAATTGTTGTGTTTCT----ATCAATAATATTGGTCATAATACCACCTGCTG 517514 || || || || |||||||| ||||| | |||||| | ||| || | | Sbjct 626182 CTTGGTCGGGATCGTCGTGTTTCTCGGGATCAACAC----GGTCATGACACCGCCGACGG 626127 Query 517515 TTTCTAAACCAAGAGAAAGAGGAGTGACATC-AACTAGGACAATATTTTGAAGTTTTTCA 517573 |||| ||||| | || | || ||||| || ||| | |||| | ||| | ||||| Sbjct 626126 TTTCCAAACCCATCGACAACGGCGTGACGTCCAACAACAACAAG-TCTTGGACCTTTTCG 626068 Query 517574 TCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 517632 | | || || |||| ||| || ||||| | || || || || || || ||||| || Sbjct 626067 TTACCTTCGCCGGACAA-AATGGCAGCTTGGACGGCGGCGCCGTACGCGACGGCTTCGTC 626009 Query 517633 AGGATTAACAG--TTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690 || || | | || || | | || || ||||| || | || || | ||| Sbjct 626008 CGGGTTGATGGACTTGCAC--AACTCCTTGCCGTTGAAGAAGTCGGAGAGCAATTGCTGA 625951 Query 517691 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 517750 ||||| || || | | || || || || || || | ||| || || || || || Sbjct 625950 ACCTTCGGGATTCTCGTGGAACCGCCGACCAAAACGACTTCGTGGACTTGGCCCTTGTCG 625891 Query 517751 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTC--TG 517808 | || | ||| || || || || ||||| | | | | |||||||| || Sbjct 625890 AACTTGGCATCTCTCAAGCACTTCTCGACTGGTTCCATGCACTTGCGGAACAAGTCCATG 625831 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 517868 ||| ||||||||| | ||||| || | | | | |||| || |||||||| | Sbjct 625830 TTCAAC--TCTTCGAATCTCGCTCTCGTGATGGAGGTGTAGAAATCGATACCTTCGAATA 625773 Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 517928 | || || | ||| || | ||||| | | || || | | | || || | ||| | Sbjct 625772 AGGAGTCGATTTCGATGGAGGTTTGCGCGGTGGAGGACAAAGTTCTCTTGGCTCTTTCGC 625713 Query 517929 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATAT--TT 517986 | || || |||| | || || ||| | || ||| | || | || | | || Sbjct 625712 ACGCGGTTCTTAAACGTCTCAACGCTCTGGCG--TTGCCGGAGATGTCCTTCTTGTGCTT 625655 Query 517987 TCTCTTGAAATCTTCAACACACCATGTTACA-AGACGATTATCAAAATCTTCACCTCCCA 518045 ||||||||| || | || | ||| | | |||| |||| ||||||||||| |||| Sbjct 625654 TCTCTTGAACTCCGCGGCAAAGTG-GTTGCTCAAACGAGTATCGAAATCTTCACCACCCA 625596 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | | || | |||| ||| || | |||| || | || ||||| | | ||| | || Sbjct 625595 AGTGCGTGTCCCCTGCCGTTGCCTTGACTTCAAAGATGCCTTCTTCGATGGTCAACAAAG 625536 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG- 518164 ||||| || || || |||| ||||||||| | || ||| |||| | | ||| Sbjct 625535 ACACATCGAAAGTACCGCCTCCCAAATCAAAAATCAACACGTTC--TTCTCCGCCGTGGA 625478 Query 518165 -------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 518217 || || || | ||| ||||| | ||||| || || ||||| || |||||||| Sbjct 625477 CGAGTTCTTCTTGTCCAAACCGTACGCGATCGCAGCCGCGGTCGGTTCGTTGATAATTCT 625418 Query 518218 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 518277 ||| || | || ||||| | ||||| || || ||||||||||| || ||||| Sbjct 625417 CAAGCAGTTCAAGCCGGCAATGACCGCCGCATCCTTGGTCGCTTGTCTTTGGGAGTCGTT 625358 Query 518278 AAAATATGCAGGAACAGTAATAACGGC 518304 ||| || || || || || | ||||| Sbjct 625357 AAAGTACGCCGGCACGGTCACGACGGC 625331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821357910826