Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 132 6e-26 seq13 114 2e-20 seq12 107 2e-18 seq14 87.8 2e-12 >seq1 Length=1352724 Score = 132 bits (146), Expect = 6e-26 Identities = 547/853 (64%), Gaps = 21/853 (2%) Strand=Plus/Plus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| || ||||| || ||||| || || || ||| ||| | || | || ||| Sbjct 25539 GCGATGGAGGCCAAGTTACAAACGGCAGTTTCTTCCGGCGAGGTGAATTCGACGATCTCT 25598 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||||||||| || ||||| |||||||| | |||||| ||| ||||||| Sbjct 25599 GTGCACAAGTTGGACGATTTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCAC 25658 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||| | | |||||| || | || || ||| || | | ||||| || | Sbjct 25659 GCATCCTTGAACAACATGTACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAAC 25718 Query 106643 CACACATCGGCGGCTGG---TACAATGGCGT-TGGCCCGTCCCTCCGCCT-CGTACTTTG 106697 || | || ||||| | | | | | | ||| | | | | ||||||| | Sbjct 25719 CAAA-----GCTGCTGGGCGTTGATCGTCTTCTTACCCTTGTTTTCTTTTTCGTACTTGG 25773 Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGT-CGGAGAGACCTGGTGCCTTGTCTGGA 106756 |||| | ||||||||||| |||||| | || | |||| | ||| || || || || Sbjct 25774 TGTACAAAGCTTCAAACTCTTCACCC-CAGCATTCGGACAAACCCGGGCACTCGTTCGGG 25832 Query 106757 CAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816 || | | | ||| | || || || || | |||||||| | || ||||| Sbjct 25833 CACATTAACGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCAC 25892 Query 106817 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 106876 | |||| | || | | | || ||||| | || ||||| ||| || || Sbjct 25893 AAACCGTAAAACAAGTCACGAGCTCTCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCG 25952 Query 106877 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG- 106935 || | || | ||| || | |||||| || || || || | || | || ||||| || Sbjct 25953 AGCCAGTCGAAGATGTCAGAGTGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGC 26012 Query 106936 --ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993 || || |||| | || || | ||| ||| |||| || ||||||||||| ||||| Sbjct 26013 TTACCGCCGCCTTGGTCCACGTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATG 26072 Query 106994 ATACCATCTGATTGACCATTTGTCCCCCGAA--TACGA-GATTTATTGGCTCTCACATCA 107050 ||||| | || ||| ||||| || | || ||||| || | |||| | | || Sbjct 26073 ATACCGTTCGAGGTACCGTTTGTGCCTCTAATGTACGACGA---AGTGGCGCGGATGTCG 26129 Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 || || || |||||||| || || |||| || || ||| || ||| | | || Sbjct 26130 TGAATAGACAAACCAATACCGCCGGCGGACTTGGAAATGCACGCGCATTCCTTCAACGTG 26189 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 | |||||||| | || ||||| ||||| || || | ||||| ||| | ||| Sbjct 26190 TCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGC 26249 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 107230 |||| || ||||| || ||||| | |||||| | ||||| | | | || || ||| Sbjct 26250 GGTCGCGGCGTACCGGCGTTGAACAAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGAC 26309 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 | | ||| || || || | | || || || | | |||||| ||||||| || Sbjct 26310 AACATGTGATACGTATCAACAGCCTTTTCGATATCCTTCTTGTGGATACCGATGGATACT 26369 Query 107291 CGCATAAACATGT 107303 | ||| ||||||| Sbjct 26370 CTCATCAACATGT 26382 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984 ||||||| ||| ||||||| || || ||||||||||| || || |||||||| ||||| Sbjct 24929 TCTTCTCGCATAAATGTTCGATGTATACGGTTCAAAGCACTCGTTGTTACCCAAAATTTG 24988 Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031 | ||| || || |||||||| ||||| | ||| || ||| |||| Sbjct 24989 GGAGGTTGACGCGGTTGGCATCGGTGCAACCAAGAGGGAGTTGCGAA 25035 >seq13 Length=1091008 Score = 114 bits (126), Expect = 2e-20 Identities = 302/451 (67%), Gaps = 14/451 (3%) Strand=Plus/Minus Query 176852 ATCCACGACAATGCGGAGGTATTTGACACAAAGACCGAACACTCTATGAGGTACCTT--C 176909 ||||||| ||| || || || || ||| |||||||||| | |||| ||| | | Sbjct 303218 ATCCACGCCAACGCCGAAGTCTTCGACGAAAAGACCGAATTGGCGTTGAG--ACCGTTGC 303161 Query 176910 AGATCTTAACGGCATGTTGTGATTCGTTCGCACACGGTGCCAATGATGTTGCCAATTCAA 176969 | | ||||| || || | ||| | ||| | ||||| || ||||| |||||||| || Sbjct 303160 AAGTTTTAACTGCTTGCTTAGATGCCTTCTCCCACGGCGCGAATGACGTTGCCAACTCTG 303101 Query 176970 TCGGACCATTTGCCGCCATTTACGCCATCTATAAATCCGGTACGGTCTCCAAGAA--TGC 177027 |||| || || ||||| || | |||| || ||| | ||| || ||||| ||| Sbjct 303100 TCGGTCCGTTCGCCGCTATCGTCACCATTTACAAAGCTGGTGGCGTGAAGAAGAAGATGC 303041 Query 177028 TGAAATGGGTAACGACGCATATTGGATTCTCTCCCTCGGAGCTGGTGGAATAGTTGTGGG 177087 || |||| | || | || ||||| | || | || || || || || | || Sbjct 303040 CGA--TGGGCGATGATTCCTACTGGATCTTGTCTTTGGGTGCGTTCGGTATCGTGATTGG 302983 Query 177088 TCTCGCGACATATGGCTATAAGATTCTTG-AGGCTCTTGGTA--CAAAAATGGCAAAACT 177144 | | || || || || ||||| |||| | || ||||| ||| | | |||||| | Sbjct 302982 TTTGGCCTTGTACGGTTACAAGAT-CTTGCACGC-CTTGGGCGGCAAGATTTGCAAAA-T 302926 Query 177145 TACACCGAGTCGTGGTATCTGTATTGAACTTGGCGCGGCCGCTGTCATCATTCTTGGCTC 177204 || ||| | ||||| || || || || ||||| ||| || || || | || || Sbjct 302925 GACCCCGTCCAGAGGTATTTGCATCGAGCTCGGCGCCGCCATGGTTATTATCATGGGTTC 302866 Query 177205 TCGCCTCGGGTGGCCACTCTCCACAACACATTGTCAAGTCGGTGCAACTGTGGGTGTCGC 177264 ||| ||||| ||||| | ||||| || || || ||||||||||| ||||| || ||||| Sbjct 302865 TCGTCTCGGCTGGCCGTTGTCCACGACTCACTGCCAAGTCGGTGCCACTGTCGGCGTCGC 302806 Query 177265 ACTCTTTGAAGGTACTGGTGGTGTGAATTGG 177295 ||| |||||| ||| ||| | || ||| Sbjct 302805 CTGCTTGGAAGGTGTTGGCGGTATTAACTGG 302775 >seq12 Length=1122692 Score = 107 bits (118), Expect = 2e-18 Identities = 263/387 (68%), Gaps = 24/387 (6%) Strand=Plus/Plus Query 169184 ACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC---ATA 169240 ||| |||||||| |||||||| | ||| ||| ||||| ||||| | || || || Sbjct 1064868 ACCTTTGATGTGCGAACCATCGTGATCTTGATCCGTCATGATCATCA-ACTTCCCGTATC 1064926 Query 169241 GCGAAGT--TCA--GAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCTTCT 169296 || | || | | ||| | || | ||| ||| || ||||| | ||||| |||| | Sbjct 1064927 GCAACGTCTTGATGGAATCTTCGTCGTACGTTTTGCCGTGTTGCAAGCCCAAAATCTGTT 1064986 Query 169297 TGAGATCGTTGAACTC----TTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACA 169352 ||| | | ||| || ||| | | | | || | | ||||||||||| || Sbjct 1064987 TGATGTGGGTGATTTCCACATTGTTCT----TTACTTGATCAAACGAAGCGTCGCGAACG 1065042 Query 169353 TTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGA 169412 ||| ||||||| | | ||||| || || |||| || | ||| |||| ||| | | Sbjct 1065043 TTCAATAACTTCCCTCTCAACGGAAACACCCCGTAGTTGTCTCTTCCGACGATGGACAAA 1065102 Query 169413 CCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACA--CTTTC 169470 || | ||||| | | ||| || ||||| ||||| || | ||| || || || ||||| Sbjct 1065103 CCGGAAACCGCCAACGCTTTGGCAGAATCCCCCTCGGTTAAAATCAGCGTGCAGTCTTTC 1065162 Query 169471 CAGATTGCG-CCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTTG 169529 || ||||| ||| || || ||||| || ||||||||||| ||||||||||| | | | Sbjct 1065163 GAG-TTGCGTCCG--CCGGCGTTGTTCGCATCGTCCAACTTCGGAATACCAGTCA-ATCG 1065218 Query 169530 GACTTGCGAG-CACCATCGGTTTTCTT 169555 | | || | |||||||||| ||||| Sbjct 1065219 CAATCGCTTGACACCATCGGTCTTCTT 1065245 >seq14 Length=1037991 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | ||| || |||| ||| || | || || |||||| || || Sbjct 66187 GCAAAATCTCTGTGCAAACCTTCGTCTCTGGAGATCAACTCGTTGGAGAAGGTGAGCCCC 66246 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | || | |||||| | ||| || || | |||||| || |||||||||||||| Sbjct 66247 GGCATCATGCCTCTCTTCTTGAGCCAGTAGATTGAGCAGAAAGAGCCGGAGAAGAAGATG 66306 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 || || || || || ||||| | | || ||||||||||| Sbjct 66307 CCTTCGACGCAGGCGAACGCGACCAAACGTTCGGCGAAGGA 66347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980645130040