Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq21 803 0.0 >seq21 Length=72700 Score = 803 bits (890), Expect = 0.0 Identities = 770/982 (78%), Gaps = 6/982 (1%) Strand=Plus/Minus Query 179757 TGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTTCTGATGATTCCA 179816 ||| | || || || | ||||| | || |||| |||||||| || | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 179817 ACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGA 179875 || | || |||| ||| |||| |||||||| || |||||||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 179876 CATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 179935 ||||||||| || ||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 179936 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 179995 |||||| || |||||| | || ||||| || || ||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 179996 CGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTT 180055 || | ||||| |||||||| || |||||||| |||| ||| ||| |||| | ||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 180056 CCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTTTCTTATCGCTTGGGTAT 180115 | | || || | | | | |||||||||||||||||||| ||||| | || || || || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 180116 GCGCCCCTGGATCTGCGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 180175 ||| || |||||| ||||| || |||||||| || || || ||| |||| |||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 180176 CGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCAC 180235 | | || || |||| || || || |||||||||| ||||| || || |||||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 180236 CTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACAT 180295 ||||||| |||| | || ||||| || |||||||||||||| |||||||| |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 180296 GCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGT 180355 ||| |||||||| ||||| ||||| |||||||| ||||| || |||||||||||||| || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 180356 TACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTT 180415 || |||||||| | |||||||| ||||| | || || ||| || |||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 180416 TGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGAT 180475 || |||||||||||||| |||||||| || ||||| || || |||||||| ||||| || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 180476 CTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCC 180535 |||||| || || || ||||||||||| |||||||| ||||||||||| || ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 180536 TGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 180595 ||| | || ||||||||||| || || || | || ||||| |||||||| ||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 180596 TTTCAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTGCTCAACACTTGGGCA 180653 ||||||||||||||||| | | ||| |||| || |||||| ||||||| ||||| Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGAT--TCAAACGGACGTGTGATCAACACATGGGCT 53161 Query 180654 GACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAAC 180713 || | | ||||| ||| || ||||||||||| |||||||||||||| ||||||||| Sbjct 53160 GATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 53101 Query 180714 TTCCCACTTGACCTGGCAGCTG 180735 |||||||||||||| ||| ||| Sbjct 53100 TTCCCACTTGACCTCGCATCTG 53079 Score = 600 bits (664), Expect = 1e-166 Identities = 749/1019 (74%), Gaps = 6/1019 (1%) Strand=Plus/Minus Query 181421 TGGTTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCT 181480 ||||| |||| | | |||||||||||||| || ||||| || || || || || |||||| Sbjct 62485 TGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGGTCT 62426 Query 181481 GGACTACTTCTTTTTCCCAC-TGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTAC 181539 ||||| || || |||||| ||| || ||||| |||| || ||||| ||||| || || Sbjct 62425 GGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAACAAC 62367 Query 181540 TTTTGTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGA-GGGTGCTAATT 181598 || || || || |||||||| ||||| || || ||| |||||||| ||||| ||| | Sbjct 62366 ATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TAACT 62308 Query 181599 TCCTTACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTT 181658 |||| || | || || |||||||| | |||| |||| || || |||||||| |||| Sbjct 62307 TCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCTTT 62248 Query 181659 GGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTT 181718 |||| || ||||| || || || ||| || ||| |||||||| ||| | ||| | | Sbjct 62247 GGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGACAT 62188 Query 181719 TTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTG 181778 | || || || |||||||| || | | ||||| |||||||| | ||||||||| ||| Sbjct 62187 TCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAATTG 62128 Query 181779 CTCGTCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTAT 181838 ||||| | | ||| || || ||||| |||||||| || || | || |||||||| | Sbjct 62127 CTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGTGT 62068 Query 181839 TCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTT 181898 | || |||||||| || || || || || || ||||| ||||||||||||| || | Sbjct 62067 TTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATCAT 62008 Query 181899 TCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGC 181958 | ||||| || | |||||||| || |||| ||| |||| || || || || ||||| | Sbjct 62007 TTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGACAC 61948 Query 181959 TCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAA 182018 | || || ||||| |||||||| || |||||| | || |||| ||| | || | ||||| Sbjct 61947 TTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGCAA 61888 Query 182019 TTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCA 182078 ||||||| | || || ||||| || || | |||| ||||| |||| || ||| Sbjct 61887 TTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATTCC 61828 Query 182079 AAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCT 182138 |||||| | ||||||||| |||||| || || |||||||| || || ||||| |||| Sbjct 61827 GTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTTCT 61768 Query 182139 GGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCT 182198 |||| ||||| |||||| | || || || ||| | ||| | || ||||| ||||||| Sbjct 61767 GGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCTCT 61708 Query 182199 TTGTTCCTGTTA-TGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAAC 182257 | || ||||||| ||||| | |||| | | || | | || | || || ||| Sbjct 61707 TCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTAAC 61649 Query 182258 CTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAG 182317 || ||||| || ||||| ||||| ||||| ||| | || ||||||| || |||||||| Sbjct 61648 CTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCGAA 61589 Query 182318 ACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTC 182377 || |||||||| ||||||||||| | || ||||| | ||||||||| | ||| | Sbjct 61588 ACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTCAA 61529 Query 182378 GATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 ||||| || ||||| ||| |||| ||||||||||| ||| | || | || ||||| || Sbjct 61528 GATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 61470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610396639770840