Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq21 688 0.0 >seq21 Length=72700 Score = 688 bits (762), Expect = 0.0 Identities = 742/980 (76%), Gaps = 2/980 (0%) Strand=Plus/Minus Query 169411 TGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTAATGATTCCA 169470 ||| | || ||||| | ||| | | || | || ||||| ||||| ||||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 169471 TGCTTACTCACAGCAGCAGCATGT-TTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 169529 ||| | ||||| | | ||| |||||||| |||||||| ||||| ||||| || || Sbjct 53997 ACATTATTAACAGCTACTTC-TGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 169530 TATCGACGGAATCAGAGAACCAGTAGCGGGTTCTTTCTTGTATGGTAACAACATCATCTC 169589 ||||| || || | || |||||| | || || | |||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 169590 TGGTGCAGTTGTTCCATCATCAAACGCTATCGGACTACACTTCTACCCAATCTGGGAAGC 169649 |||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 169650 AGCAACTGTTGATGAATGGTTGTATAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTT 169709 ||| || ||||||| ||| | || || ||||| ||||| ||| | | | | ||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 169710 CCTTATTGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGAAT 169769 | | || || | | |||||||||| | ||||||| || |||| | | |||||||| Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 169770 GCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCATTCGCTGTATTCTT 169829 ||||||||||||| ||| || |||||||| || ||| | |||||| || |||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 169830 AGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 169889 | |||||| | || ||||| || |||||||| |||||||| || ||||| || || || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 169890 TTTCAACTTTATGTTCGTTTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACAT 169949 ||||||||| ||| |||| ||||| || ||||| ||||| || ||||| || |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 169950 GGCAGGAGTAGCAGGAATGTTCGGAGGATCTTTATTCTCAGCAATGCATGGTTCACTTGT 170009 | |||||||| || | ||||| || || | ||||| || ||||| |||||||| || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 170010 TACTTCATCTCTAATCAGAGAAACAACAGAGCAAGAGTCACAGAACTATGGTTATAAGTT 170069 ||||| || || ||| | ||||| || ||| | || ||| ||| || || ||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 170070 CGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTAT 170129 ||||||||||||||| || |||||||| ||||| || ||||||||||| || |||||||| Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 170130 CTTCCAGTATGCTTCATTCAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGTTTTCCC 170189 |||||| || |||||||||||||||||| | || ||||||||||| || | | || Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 170190 TGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACTTGAATGG 170249 ||| | | | ||||| || || | ||||| | || ||||| |||||| | || || Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 170250 TTTCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAATCGTCCCAACATGGGGTGA 170309 |||||||| ||||| ||||| || ||| | |||||| | || ||||||| ||| Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 170310 TGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTT 170369 | || ||||| | || ||| | ||||||||||| ||||| || | || || |||||||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 53099 Query 170370 CCCACTAGACCTAGCATCTG 170389 |||||| ||||| ||||||| Sbjct 53098 CCCACTTGACCTCGCATCTG 53079 Score = 518 bits (574), Expect = 4e-142 Identities = 747/1048 (71%), Gaps = 29/1048 (3%) Strand=Plus/Minus Query 170523 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGG 170582 |||||||| || | || |||||| | ||| | || ||||| |||||| |||| ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 170583 TCTGGTCTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTA--GGGA 170640 ||||| |||||| | | || ||||||||| | || | ||||| ||| |||| || | Sbjct 62428 TCTGGACTTTTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGG--CTTACTGGAA 62371 Query 170641 CTACCTTCGTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTA 170700 | || ||||| || |||||||| ||||| ||| | || ||||| ||||| || |||| Sbjct 62370 CAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTA 62311 Query 170701 ACTTCCTAACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCC 170760 ||||||| || ||||||| || || || |||| |||| || ||||| ||| Sbjct 62310 ACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 170761 TTTGGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGA 170820 |||||||||| |||||||||||| || ||||||| ||||| || || ||||||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 170821 ACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGA 170880 || ||||| | || |||| |||||| | || || || ||||| | |||||||| | Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 170881 TCGCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAG 170940 | || | ||| || | || |||||||| | |||||||| || || || | Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 170941 TCTTCACTAGC-ATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCA 170999 | || || | | || || || || ||||| || || |||||||||| |||||| Sbjct 62070 TGTT-TGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCA 62012 Query 171000 TCATTCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATT 171059 ||||| ||||| || | |||||| |||| ||| | ||| | ||||||||||||||| Sbjct 62011 TCATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGG 61952 Query 171060 ACATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGT 171119 ||| | || ||||| ||||||||||| || || || |||| |||| |||| | | ||| Sbjct 61951 ACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGT 61892 Query 171120 GCCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGAT 171179 || ||||| || ||||| || |||||||| | | |||| || |||| Sbjct 61891 GCAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAG------------ATGGTGAT 61844 Query 171180 AATAAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTAC 171239 |||||| ||||||||||| || | || || || | |||||| |||||| Sbjct 61843 -----GGTTCAAA----CACATTCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTAC 61793 Query 171240 AGTATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAA 171299 ||| | || || ||| | |||||||||||||| || ||| | |||||||| ||||| Sbjct 61792 TCAATGGTAACGGCTAACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAG 61733 Query 171300 AGATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCA-TGGGTATGTGGACATCATCTAT 171358 | | | |||||| | ||| | ||||| ||||| | ||||| | |||| ||| | | Sbjct 61732 CGTTGGCTTCACTTCTTCATGCTCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACT 61674 Query 171359 AGGTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAG 171418 || | ||||| |||||||||||||| | |||||||| || ||||| |||||||| | Sbjct 61673 TGGAGTAGTAGGATTAGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCG 61614 Query 171419 AGCAGCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGG 171478 || |||||||| || |||||||| || |||||||| ||||| || |||||||| ||||| Sbjct 61613 TGCTGCAGAAGATCCTGAGTTCGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGG 61554 Query 171479 TATGAGAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGA 171538 || | ||||||||| || | || || || ||||| ||| | |||||||| || || Sbjct 61553 AATCCGTGCATGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGA 61494 Query 171539 AGTGTTACCAAGAGGTAACGCACTTTAA 171566 || | ||| | || ||||| |||||| Sbjct 61493 GGTACTTCCACGTGGAAACGCTCTTTAA 61466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212647956640