Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq21 762 0.0 >seq21 Length=72700 Score = 762 bits (844), Expect = 0.0 Identities = 758/977 (78%), Gaps = 6/977 (1%) Strand=Plus/Minus Query 167872 TGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 167931 ||| | || |||||| | ||||| | || |||| |||||||| ||| | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 167932 ACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 167990 || | || |||| ||| ||||| |||||||| || ||| |||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 167991 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 168050 |||||| || || ||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 168051 TGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCATCTGGGAAGC 168110 |||||| || || ||| | || || ||||| |||||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 168111 AGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGTCTTTCACTT 168170 ||| |||| ||||||||| | || |||||||| |||| ||| || | || | |||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 168171 CCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTAT 168230 | ||||||| | | | |||||||||| ||||| ||||| ||||||| |||||||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 168231 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCT 168290 |||||| |||||| ||| || |||||||| || || || || || | |||||||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 168291 AGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAAC 168350 | || || |||| || || ||||||||| | ||||| || || || || ||||| Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 168351 ATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATAT 168410 ||||||| |||| | || ||||| ||||||||||| || || ||||| || ||||| || Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 168411 GCTCGGCGTTGCTGGGGTATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTG 168468 ||| || || ||||| ||||| ||||| || ||| | |||||||||||| | Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTC--TGCTATGCACGGTTCACTC 53461 Query 168469 GTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAG 168528 || |||||||| || | | || || ||||| | |||||| ||| || |||||| Sbjct 53460 GTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAG 53401 Query 168529 TTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTG 168588 ||||||||||||||||| || |||||||| ||||| ||||| ||||||||||| ||| | Sbjct 53400 TTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTT 53341 Query 168589 ATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGG 168648 ||||||||||||||||||||||||||||| || || | ||||||||||| ||| ||| Sbjct 53340 ATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGG 53281 Query 168649 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAAC 168708 ||||| | || ||||||||||| || ||||| | || || ||||| |||||||| ||| Sbjct 53280 CCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAAC 53221 Query 168709 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCA 168768 || ||||||||||||||||| | | ||| | || |||||| | ||||| ||||| Sbjct 53220 GGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCT 53161 Query 168769 GATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 168828 ||| || | ||||| ||| || ||||||||||| ||||| ||||||||||| |||||| Sbjct 53160 GATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 53101 Query 168829 TTCCCACTCGATCTTGC 168845 |||||||| || || || Sbjct 53100 TTCCCACTTGACCTCGC 53084 Score = 578 bits (640), Expect = 5e-160 Identities = 751/1031 (73%), Gaps = 8/1031 (1%) Strand=Plus/Minus Query 169301 GGGTGGTTCGATGTTCTCGATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGG 169360 || |||||||| | ||||||||||| || || ||||| || |||||| | |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 169361 TCTGGTCTACTTCTTCTTCCCAC-TGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTAC 169419 ||||| || || || |||||| ||| || |||| |||| || ||||| ||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 169420 AGCGTTTGTTACTTCCTGGTACACCCACGGACTCGCT--TCCAGTTACTTAGAAGGCGCT 169477 | | || || ||||| |||||||| ||||| | || | || ||| | ||||| | Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCA--TACCTTGAAGGGTGT 62312 Query 169478 AACTTCCTCACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTG 169537 |||||||||||| | || || || || | |||| |||| ||||||||| || | Sbjct 62311 AACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTC 62252 Query 169538 CTATGGGGTCCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGG 169597 || ||||| |||||||||||||| || ||| || ||||||||| | ||||| | ||| Sbjct 62251 CTTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGG 62192 Query 169598 AACTTTGTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAA 169657 | || ||||| ||||| || ||||||| ||| || || || |||||| | || |||||| Sbjct 62191 ACATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAA 62132 Query 169658 TTGGCACGTCTTATTGGCATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCT 169717 | || ||| | || ||||| || || || ||||||||||| | || |||||| Sbjct 62131 ATTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCT 62072 Query 169718 GTATTTGTCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCC 169777 || ||||| ||| || ||||| ||||||||||| || || ||||||||||| || Sbjct 62071 GTGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCA 62012 Query 169778 TCCTTTGGAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGG 169837 || ||||| ||| | | ||| ||| | || | | ||| | ||||| |||||||||||| Sbjct 62011 TCATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGG 61952 Query 169838 ACGTTGAATCCATTCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCT 169897 || | || ||||||||||||||||| ||||| || | | || | |||| | |||| | Sbjct 61951 ACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGT 61892 Query 169898 GCTATCCATGGTGTTACAGTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACT 169957 || || || || | || |||||||||||| | | ||||| ||||| |||| || Sbjct 61891 GCAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACA 61832 Query 169958 TTCAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGC 170017 ||| || || | | || || | |||||||||||| || ||||| || || ||||| Sbjct 61831 TTCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGT 61772 Query 170018 TTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATG 170077 |||||||| ||||| |||||| | || || || ||||||||||||||||| || |||||| Sbjct 61771 TTCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATG 61712 Query 170078 TTGTTTGTGCCTGTTA-TGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCT 170136 | || || ||||||| ||||| | |||| || | |||| | | || | || || Sbjct 61711 CTCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACT 61653 Query 170137 CAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATT 170196 || || ||||| ||||| ||||| || |||||| | || ||||||||||| || || Sbjct 61652 TAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTT 61593 Query 170197 TGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACC 170256 || || |||||||| || ||||| || | || |||||| | ||||||||| ||||| | Sbjct 61592 CGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGC 61533 Query 170257 TGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGC 170316 | ||||| || ||||||||| | | ||||| || || || ||||| | || ||||| Sbjct 61532 TCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 61473 Query 170317 ACTGTGATCCA 170327 || | || || Sbjct 61472 TCTTTAATTCA 61462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574473449200680