Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq21 816 0.0 >seq21 Length=72700 Score = 816 bits (904), Expect = 0.0 Identities = 768/976 (79%), Gaps = 2/976 (0%) Strand=Plus/Minus Query 163793 ATGGGTGACTTCCACAAACAACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCC 163852 |||| | ||||| || | ||||| | || | || |||||||| || | |||||||| Sbjct 54058 ATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCC 53999 Query 163853 TACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGG 163911 ||| | | |||| || ||||| |||||||| || ||| |||| ||||| || |||| Sbjct 53998 TACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGG 53940 Query 163912 ACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCT 163971 ||||||||||||||||||| || || | || || || ||||| || ||||||||||||| Sbjct 53939 ACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 53880 Query 163972 CTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAG 164031 ||||||| || ||||| | || || || || || |||||||||||||| || ||||||| Sbjct 53879 CTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 53820 Query 164032 CCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACT 164091 | || | |||||||| ||||||||||||||||| |||| ||| ||| |||| | |||| Sbjct 53819 CAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACT 53760 Query 164092 TCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTA 164151 || | ||||| | | | |||||||||||||||||||||| || || | |||| | || | Sbjct 53759 TCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAA 53700 Query 164152 TGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCC 164211 ||||||||||||| ||| ||||||||||| || || ||||| ||| | ||||| ||| Sbjct 53699 TGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCA 53640 Query 164212 TGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCA 164271 | | || || |||| || || || |||||||||| ||||| || || || ||||| | Sbjct 53639 TCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAA 53580 Query 164272 CCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATA 164331 | ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| | Sbjct 53579 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 53520 Query 164332 TGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 164391 |||| || || ||||| ||||| || ||||| || ||| ||| ||||||||||| || | Sbjct 53519 TGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCG 53460 Query 164392 TTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGT 164451 | |||||||| || | |||||||| || || | || || ||| || ||||||| Sbjct 53459 TAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGT 53400 Query 164452 TTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGA 164511 | || ||||||||||| || ||||||||||| || |||||||||||||| || ||||| | Sbjct 53399 TCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTA 53340 Query 164512 TCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 164571 |||||||||||||||||||||||||||| ||||| | ||||||||||| ||| |||| Sbjct 53339 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGC 53280 Query 164572 CTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACG 164631 |||| | || ||||||||||| || |||||| |||| || ||||| |||||||| |||| Sbjct 53279 CTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACG 53220 Query 164632 GTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAG 164691 | ||||||||||||||||| | | ||| | || |||||| ||||||| ||||| | Sbjct 53219 GATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTG 53160 Query 164692 ACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACT 164751 | || | ||||| ||| || ||||||||||| ||||||||||||||||||||||||| Sbjct 53159 ATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 53100 Query 164752 TCCCTCTGGATCTCGC 164767 |||| || || ||||| Sbjct 53099 TCCCACTTGACCTCGC 53084 Score = 563 bits (624), Expect = 1e-155 Identities = 743/1022 (73%), Gaps = 6/1022 (1%) Strand=Plus/Minus Query 165188 GGGTGGTTCGATGTCCTCGATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGG 165247 || |||||||| | | |||||||||||||| || || |||||||| || || |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 165248 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 165306 ||||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 165307 TACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGA-GGGTGCAA 165365 || |||| || ||||| || ||||| || |||||||| || || || ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 165366 ACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTC 165425 ||| || ||| | ||||| || || ||| || |||| |||| || || ||||| || | Sbjct 62309 -CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 165426 TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGG 165485 | ||||| || || || ||||| || ||| | ||| |||||||| ||| | ||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 165486 CTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAAT 165545 | || || || || ||||| || || | |||| || || ||||||||||| |||||| Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 165546 TAGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTG 165605 | || ||| | || ||||| ||||| || ||||| ||||| | || || |||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 165606 TTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCAT 165665 | ||||| || || || || ||||| || || ||||| ||||||| || || |||| Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 165666 CTTTCGGGGTCGCAGCAATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGA 165725 | || || || || | ||| ||| | || |||| ||| | ||||| ||||| ||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 165726 CCTTGAATCCCTTTCATATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTG 165785 | | || || || || |||||||| || || ||| | || |||| ||| | |||| || Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 165786 CCATCCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTT 165845 | || || || | || |||||||| || || | |||||||||| | | |||| || | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 165846 TCAAGGCATTTGACTCTACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTT 165905 || ||||| || | ||||||| ||||| || ||||||||||| || || ||||||| Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 165906 TCTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGC 165965 ||||||| ||||| |||||| | || || || ||| | ||| | || ||||| |||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 165966 TGTTTGTTCCTGTTA-TGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTC 166024 | || || ||||||| ||||| | |||| | | || | | || | || || Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 166025 AACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTT 166084 ||||| ||||| || ||||| ||||| ||||||||| | || |||||||| || ||||| Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 166085 GAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCA 166144 ||||| ||||||||||| |||||||| | || ||||| | ||||| ||| ||||| | Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCT 61532 Query 166145 GTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCG 166204 ||||| || ||||| ||| |||| |||||||| || || || || | || ||||| Sbjct 61531 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 61472 Query 166205 CT 166206 || Sbjct 61471 CT 61470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556924653807240