Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq21 652 0.0 >seq21 Length=72700 Score = 652 bits (722), Expect = 0.0 Identities = 737/985 (75%), Gaps = 2/985 (0%) Strand=Plus/Minus Query 171828 ATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCC 171887 |||| | || |||||| | ||| | | || | || |||||||||||| | |||||||| Sbjct 54058 ATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCC 53999 Query 171888 ATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 171947 || | ||||| | | |||||||| |||||||| ||||| ||||| || || Sbjct 53998 TACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 171948 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 172007 ||||| || || | || ||||| | || || | | || || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 172008 TGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGC 172067 |||||| || ||||| |||||||||| || || || ||||||||||| ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 172068 AGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTT 172127 ||| || | ||||| ||| | ||||| ||||| ||||| ||| | | | | ||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 172128 CCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTAT 172187 | | ||||| | | |||||||||| | ||||||| || |||| | | ||||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 172188 GAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCT 172247 | | || ||||| |||||| || || || |||||| |||| ||| ||| || ||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 172248 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 172307 | || ||| |||| ||||| || |||||||| |||||||| || ||||| || || || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 172308 GTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACAT 172367 |||||||| ||| |||| ||||| || ||||| ||||| || ||||| || |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 172368 GGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGT 172427 | |||||||| || | || || || || | ||||| || ||||||||||| | || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 172428 TACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTT 172487 || ||||| || ||| | || || ||||| |||||| ||| ||||||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 172488 CGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTAT 172547 ||||||||||||||| || |||||||| ||||| || ||||||||||| || |||||||| Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 172548 CTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCC 172607 |||||| || ||||| |||||||||||| | || ||||||||||| || | | || Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 172608 TGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 172667 ||| | | | ||||| || || | ||||| | ||| ||||| |||||||||||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 172668 TTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTC-CTACATGGGGTG 172726 |||||||||||||| ||||| |||||| | ||||| | | || || ||||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGG-ACGTGTGATCAACACATGGGCTG 53160 Query 172727 ACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACT 172786 | || | ||| | || ||||| ||||||||||| ||||| || | || || ||||||| Sbjct 53159 ATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 53100 Query 172787 TCCCATTAGACCTTGCTTCTGCAGA 172811 ||||| | ||||| || |||| ||| Sbjct 53099 TCCCACTTGACCTCGCATCTGTAGA 53075 Score = 527 bits (584), Expect = 7e-145 Identities = 749/1048 (71%), Gaps = 29/1048 (3%) Strand=Plus/Minus Query 172945 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGG 173004 |||||||| || | || |||||| | ||| | || |||||||||||| | || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 173005 TCTGGTCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTA--GGAA 173062 ||||| |||||| | | || ||||| ||| || | | ||||| ||| |||| |||| Sbjct 62428 TCTGGACTTTTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGG--CTTACTGGAA 62371 Query 173063 CTACCTTCGTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAA 173122 | || ||||| || |||||||| ||||| ||| | ||| |||||| |||||||| | Sbjct 62370 CAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTA 62311 Query 173123 ACTTTTTAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCC 173182 |||| | || ||||||| || || || |||| |||| || ||||| ||| Sbjct 62310 ACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 173183 TTTGGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGA 173242 |||||||||| |||||||||||| ||| |||||||| ||||| || ||| |||||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 173243 ACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGA 173302 || ||||| | || |||| |||||| | || || || ||||| ||||| ||||| | Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 173303 TCGCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAG 173362 | || | ||| || | || |||||||| | |||||||| || || || | Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 173363 TCTTCACTAGC-ATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCT 173421 | || || | | || | || |||||||| ||||| |||||||||| ||||| Sbjct 62070 TGTT-TGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCA 62012 Query 173422 TCATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATT 173481 ||||| ||||| || | ||| || |||| ||| | ||| | ||||||||||||||| Sbjct 62011 TCATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGG 61952 Query 173482 ACATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGT 173541 ||| | || ||||| ||||||||||| || || || |||| |||| |||| | || ||| Sbjct 61951 ACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGT 61892 Query 173542 GCCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAA 173601 || ||||| || ||||| || |||||||| | | |||| || ||| Sbjct 61891 GCAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAG------------ATGGTGAT 61844 Query 173602 GGTAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTAT 173661 || ||||| | || ||| | ||||| | || || || | |||||| ||||| Sbjct 61843 GG-----TTCAAAC----ACATTCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTAC 61793 Query 173662 AGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAA 173721 ||| | || || ||| | |||||||||||||| || ||| | || || |||||||| Sbjct 61792 TCAATGGTAACGGCTAACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAG 61733 Query 173722 AGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCA-TGGGTATGTGGACATCATCCAT 173780 | | | |||||| ||||| | ||||||||||| | ||||| | |||| ||| | | Sbjct 61732 CGTTGGCTTCACTTCTTCATGCTCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACT 61674 Query 173781 AGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAG 173840 || | ||||| | ||||||||||| | ||||||||||| ||||| |||||||| | Sbjct 61673 TGGAGTAGTAGGATTAGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCG 61614 Query 173841 AGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGG 173900 || ||||||||||| |||||||| || |||||||| ||||| || |||||||| ||||| Sbjct 61613 TGCTGCAGAAGATCCTGAGTTCGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGG 61554 Query 173901 TATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGA 173960 || | ||||||||| || || |||||| || ||||| ||| | ||||| || || || Sbjct 61553 AATCCGTGCATGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGA 61494 Query 173961 AGTGTTACCAAGAGGTAACGCACTTTAA 173988 || | ||| | || ||||| |||||| Sbjct 61493 GGTACTTCCACGTGGAAACGCTCTTTAA 61466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051045636560