Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq21 773 0.0 seq20 84.2 2e-11 >seq21 Length=72700 Score = 773 bits (856), Expect = 0.0 Identities = 761/980 (78%), Gaps = 2/980 (0%) Strand=Plus/Minus Query 162394 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162453 ||| | ||||| || | ||||| | || |||| |||||||| ||| | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 162454 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 162512 || | || |||| || ||||| |||||||| || ||| |||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 162513 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 162572 |||||| || || ||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 162573 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 162632 |||||| || ||||| | || ||||| || || ||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 162633 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTT 162692 || |||||||||||||||| || |||||||| |||| ||| || | |||| ||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 162693 CCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTAT 162752 | | ||||| | | | | |||||||| ||||| ||||| || || | |||| | || || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 162753 GCGTCCATGGATCTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCT 162812 |||||| |||||| ||||| |||||||| ||||| ||||| ||| | ||||| ||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 162813 GGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTAC 162872 | || || |||| || || ||||||||||||| ||||| | ||||| ||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 162873 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACAT 162932 ||||||| |||| | || ||||| || ||||||||||| || ||||| || |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 162933 GTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGT 162992 | | || || || ||||| |||||||||||||| ||| ||| ||||||||||| | || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 162993 TACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTT 163052 || |||||||| ||||||| || ||||| | || ||| ||| || |||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 163053 CGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 163112 ||| |||||||||||||| |||||||| || || || || ||||||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 163113 CTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCC 163172 ||||||||| || |||||||||||||| ||||| | ||||||||||| ||| ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 163173 TGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGG 163232 ||| | || ||||||||||| || ||||| | || || ||||| |||||||| ||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 163233 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 163292 ||||||||||||||||| | | ||| | || |||||| | ||||| ||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 163293 CGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTT 163352 || | |||||||| | ||||||||||| ||||||||||| || ||||||||||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 53099 Query 163353 CCCACTTGACCTGGCAGCTG 163372 |||||||||||| ||| ||| Sbjct 53098 CCCACTTGACCTCGCATCTG 53079 Score = 607 bits (672), Expect = 9e-169 Identities = 760/1030 (74%), Gaps = 12/1030 (1%) Strand=Plus/Minus Query 163615 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGG 163674 || ||||| || | | ||||||||||||||||| || ||||||||||| | |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 163675 TCTGGATTACTACTTCTTCCCAC-TGCTTATATGGCAATTGGTGGCTGGCTTACTGGTAC 163733 |||||| | || || |||||| ||| || | ||| ||||||| ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 163734 AACTTTCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGA-GGGTGCTA 163792 ||| ||||| || || |||||||| || || | |||| ||| || ||||| ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TA 62311 Query 163793 ATTTTCTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTTC 163852 | || ||||| | || || |||||||| | |||| |||| || || |||||||| | Sbjct 62310 ACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 163853 TCTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGA 163912 | ||||| || || || || || || ||| || ||| |||||||| ||| | |||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 163913 ATTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAAC 163972 || || || || |||||||| |||| | || || || |||||||| ||||||||| Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 163973 TTGCTCGCCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTG 164032 ||||||| | ||| | || ||||| |||||||| ||||| | || ||||||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 164033 TCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCAT 164092 | || || ||| || || || ||||| || || |||||| |||||||||| || |||| Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 164093 CTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGA 164152 | ||||| || || | ||| ||| | || | | ||| | ||||| || || ||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 164153 CTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTG 164212 | | ||||| ||||| ||||||||||| |||||| |||| || | |||| | || | || Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 164213 CTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCT 164272 | |||||||||| || || || || ||| | | |||||||| || ||||||| | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 164273 TTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCT 164332 | || || | | || || | |||||||||||| || ||||| || || ||||| | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 164333 TCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 164392 ||||||| ||||| |||||||| || || || |||||||| |||||||| || |||||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 164393 TGTTTGTGCCTGTTA-TGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTC 164451 | || || ||||||| ||||| |||||| || | |||| | | || | || || Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 164452 AATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTC 164511 || || ||||| ||||| || ||| |||||||| | || |||||||||||||||||| Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 164512 GAGACTTTCTATACCAAGAACAT-CTTATTGAACGAAGGACTCCGTGCATGGTTAGCACC 164570 || || ||||| || |||||||| ||| || ||||||||| ||||||||||| | ||| | Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTT-AACGAAGGAATCCGTGCATGGATGGCAGC 61533 Query 164571 AGTTGACCAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAAT 164628 || |||| || || ||| |||| ||||| || || ||||| || | || || Sbjct 61532 TCAAGATCAGCCTCATGAAAAC--CTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAAC 61475 Query 164629 GCGCTTTAAT 164638 || ||||||| Sbjct 61474 GCTCTTTAAT 61465 >seq20 Length=43614 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 158989 TAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 159047 |||||||| ||||||||||| | ||||||||||| || ||||||||||||||||||||| Sbjct 33397 TAGCTCAGTTGGATAGAGCACCAGCCTTCTAAGCTGTTGGTCACAGGTTCGAGTCCTGT 33455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557583853634200