Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq21 677 0.0 >seq21 Length=72700 Score = 677 bits (750), Expect = 0.0 Identities = 724/963 (75%), Gaps = 2/963 (0%) Strand=Plus/Minus Query 167109 ACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCTACGTTGCTTGCA 167168 ||| | |||||| | || |||| |||||||| || | ||||||||||| || | || Sbjct 54045 ACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCTACATTATTAACA 53986 Query 167169 GCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGACATCGATGGTAT 167227 || || ||||| |||||| | || ||| ||| |||||||| ||||||||||||||||| Sbjct 53985 GCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGACATCGATGGTAT 53927 Query 167228 CCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGT 167287 || || ||||| |||| ||||| ||||| || |||||||||||||||||||| || || Sbjct 53926 TCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAGT 53867 Query 167288 TCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCAACCCTCGA 167347 |||| | || || ||||| || ||||||||||| || |||||||||||||| || || || Sbjct 53866 TCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTACACTTGA 53807 Query 167348 CGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGGCAT 167407 |||||| | ||||| ||||| |||| ||| || | || | |||||| | || || | Sbjct 53806 TGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAGT 53747 Query 167408 CTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGAT 167467 | | | || ||||||||||||||||| || || | |||| | || |||||||| ||||| Sbjct 53746 ATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAATGCGTCCTTGGAT 53687 Query 167468 CTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTT 167527 | ||| || ||||||||||| || || || ||| |||| |||||| || | || || | Sbjct 53686 CGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCATCATTTACCCAAT 53627 Query 167528 CGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACAT 167587 ||| || || ||||||||||||| |||||||||||||| ||||| || ||||||| ||| Sbjct 53626 CGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAACTTTCAACTTCAT 53567 Query 167588 GCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGC 167647 | | || ||||| || |||||||||||||| |||||||| ||||| ||||| || || || Sbjct 53566 GATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGAGTAGC 53507 Query 167648 TGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCT 167707 ||| |||||||| ||||| || ||| ||| ||||||||||| || || || ||||| || Sbjct 53506 TGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGTAACTTCTTCACT 53447 Query 167708 GGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGA 167767 | |||||||| || || | || || ||| || ||||||||||| || ||||| Sbjct 53446 TATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTTCGGACAAGAAGA 53387 Query 167768 AGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGC 167827 |||||| || ||||| || |||||||| ||||||||||| || || |||||||||||||| Sbjct 53386 AGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTATCTTCCAATACGC 53327 Query 167828 ATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTAT 167887 || ||||||||||| || || || ||||||||| | || |||||||| | || || Sbjct 53326 TTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCCTGTAATGGGAAT 53267 Query 167888 CTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAACTTCAA 167947 ||||| |||||||| ||||| ||||||||||| Sbjct 53266 CTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGGATTCAACTTCAA 53207 Query 167948 CCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTCAACCG 168007 |||||| | | ||| || || | || ||||| || | | ||||| Sbjct 53206 CCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGATATTGTAAACCG 53147 Query 168008 TGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCT 168067 |||| || ||||||||||| |||||||||||||| |||||||||||||| || ||||| Sbjct 53146 TGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCT 53087 Query 168068 TGC 168070 || Sbjct 53086 CGC 53084 Score = 580 bits (642), Expect = 1e-160 Identities = 757/1041 (73%), Gaps = 5/1041 (0%) Strand=Plus/Minus Query 168477 GGGTGGTTCGATGTCCTCGATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGG 168536 || |||||||| | | |||||||||||||| || || |||||||| || || |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 168537 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 168595 ||||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 168596 TGCTTTCGTCACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAA 168655 | ||||| || ||||| || ||||| || |||||||| || || || || || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 168656 CTTTCTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCT 168715 ||| || ||| | ||||| || ||| || | | |||| || || ||||| || || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 168716 CTGGGGTCCTGAGGCACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGC 168775 ||||| || || |||||||| || ||| | |||||||||||||| ||| | ||| | Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 168776 TTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACT 168835 || || || || ||||| || || | ||||||| || ||||||||||| |||||| | Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 168836 GGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGT 168895 || ||| | || ||||| ||||| || ||||| ||||| | || || ||||| Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 168896 TTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATC 168955 ||||| || || || || ||||| || || ||||| ||||||| || || ||||| Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 168956 TTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGAC 169015 || || || | | ||| ||||| || |||| ||| | ||||| ||||| |||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 169016 ACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGC 169075 ||| || ||||| || |||||||| ||||| ||| | | || | ||| | |||| ||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 169076 CATTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTT 169135 ||||| || | || |||||||| || || | |||||||||| |||| || || Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATT 61830 Query 169136 CAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTT 169195 | ||||| || ||||| | ||| ||||| || |||||||| || || |||||||| Sbjct 61829 CCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTT 61770 Query 169196 CTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCT 169255 |||||| ||||| || ||| | || ||| || ||| | ||| | || ||||| ||||| Sbjct 61769 CTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCT 61710 Query 169256 GTTTGTTCCTGTTA-TGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCA 169314 || || ||||||| ||||| | |||| | | || | | || | || || | Sbjct 61709 CTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTA 61651 Query 169315 ACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTG 169374 |||| ||||| || ||||| || || ||||||||| | || ||||||||||| ||||| | Sbjct 61650 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCG 61591 Query 169375 AGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTA 169434 | || |||||||| |||||||| || | |||||||| | ||||||||| | ||| || Sbjct 61590 AAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTC 61531 Query 169435 TTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCC 169494 ||||| |||||||| ||| |||| ||||||||||| |||||||| || || || || | Sbjct 61530 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 61471 Query 169495 TGTGAACCCATTCTTTGTTGT 169515 | | | | | || ||||||| Sbjct 61470 TTTAATTCAACTC-TTGTTGT 61451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560607852840400