Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq21 765 0.0 >seq21 Length=72700 Score = 765 bits (848), Expect = 0.0 Identities = 762/986 (77%), Gaps = 1/986 (0%) Strand=Plus/Minus Query 215286 GGGACGAGTTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTG 215345 |||||| |||||| ||| | ||||| ||||| || ||| | ||| | || ||||| | Sbjct 54073 GGGACGT-TTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCG 54015 Query 215346 GTGTCCTCATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCG 215405 |||| | ||||| ||| | | ||||||| || ||||||||||||||||||| Sbjct 54014 GTGTATTAATGATCCCTACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATCG 53955 Query 215406 CTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATG 215465 | || ||||| || || ||||| || || | |||||||| |||| || | ||||| | Sbjct 53954 CAGCTCCTCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACG 53895 Query 215466 GTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCT 215525 | ||||||||||||||||||||||| || |||| |||||||| |||||| | ||||||| Sbjct 53894 GAAACAACATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCT 53835 Query 215526 ACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAAC 215585 |||| |||||||||||||| ||| |||| || ||||| ||||| |||||||||| ||| | Sbjct 53834 ACCCAATCTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGC 53775 Query 215586 TGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTT 215645 | | | | |||||| |||| || | | | ||||| || | ||||||| |||| Sbjct 53774 TTATCGTATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTT 53715 Query 215646 CTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTG 215705 | | | | ||||| ||| | ||||||||| ||| |||||||| || |||||| | |||| Sbjct 53714 CATTCCGTTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTG 53655 Query 215706 CCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCAC 215765 | |||||||||| | | || ||| |||| ||||| ||||||||||| | |||||| | Sbjct 53654 CAACTGCAGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTC 53595 Query 215766 TTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGA 215825 |||| || |||||||| ||||||| |||| | || |||||||||||||||||||| || | Sbjct 53594 TTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTA 53535 Query 215826 TGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAA 215885 ||||||||||||||||| | || || |||||||| |||||||||||| | |||||||| | Sbjct 53534 TGCACCCATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTA 53475 Query 215886 TGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGA 215945 ||||||||||||| || || ||||| || ||| | || || |||||| | ||||| | Sbjct 53474 TGCACGGTTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTA 53415 Query 215946 ACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTT 216005 || || ||||||||||||||||| || || || |||||||| |||||||| ||||||| Sbjct 53414 ACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTT 53355 Query 216006 ACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCT 216065 |||| || || || |||||||||||||| || |||||||||||| | || ||||||| Sbjct 53354 ACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCT 53295 Query 216066 TCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGG 216125 |||| || | ||||| || | |||||| || || | ||| | || ||||||| Sbjct 53294 TCCTCGCTATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGG 53235 Query 216126 CGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTA 216185 | |||||||||||||| ||||||||||||||||| || ||||| || || || | Sbjct 53234 CTTTCAACCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGA 53175 Query 216186 TTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGC 216245 | || ||||| || || | ||| | || ||||||||||||||||||||||||| Sbjct 53174 TCAACACATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGC 53115 Query 216246 GTAACGCTCACAACTTCCCATTAGAC 216271 |||||||||||||||||||| | ||| Sbjct 53114 GTAACGCTCACAACTTCCCACTTGAC 53089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745081404416080