Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq21 787 0.0 >seq21 Length=72700 Score = 787 bits (872), Expect = 0.0 Identities = 761/975 (78%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 181803 TGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCA 181862 ||| | || || || | || ||| | || |||| ||||| ||||| | |||||||| Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 181863 ACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGA 181921 || | || | || || ||||| |||||||| || ||| | ||||| ||||| || || Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 181922 TATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTC 181981 ||||| ||||| || || || ||| |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 181982 TGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGC 182041 ||||||||| || || | || ||||| || || |||||||||||||||||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 182042 TGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTT 182101 || |||||||||||||||| || |||||||| |||| ||| || | || | ||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 182102 CCTGATCGGCATCTACGCCTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTAT 182161 | | ||||| | | | |||||||| ||||||||||| ||||| | ||| ||||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 182162 GCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTT 182221 |||||| |||||| |||||| ||||||||||| || || || ||| |||| |||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 182222 AGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAAC 182281 | || || |||| || || || ||||| || | ||||| || || || || ||||| Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 182282 ATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACAT 182341 ||||||| ||| | || ||||| |||||||||||||| |||||||| || |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 182342 GTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGT 182401 | | || ||||| |||||||||||||||||||| || ||| ||||||||||| | || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 182402 TACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTT 182461 || |||||||| ||||||| || |||||| | || ||| ||| || |||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 182462 CGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGAT 182521 ||| |||||||||||||| || ||||| || || || || || |||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 182522 CTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCC 182581 |||||||||||| |||||||||||||| ||||| | ||||||||||| ||| ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 182582 TGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGG 182641 ||| | |||||||||||||| || |||||| | || || ||||| |||||||| ||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 182642 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGA 182701 ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 182702 TGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 182761 | | | ||||||||| |||||||||||||| ||||| ||||||||||| |||||||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 53099 Query 182762 CCCACTAGATCTTGC 182776 |||||| || || || Sbjct 53098 CCCACTTGACCTCGC 53084 Score = 569 bits (630), Expect = 2e-157 Identities = 745/1026 (73%), Gaps = 4/1026 (0%) Strand=Plus/Minus Query 183175 GGGTGGTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGG 183234 || |||||||| | | ||||||||| |||| || || || || || || || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 183235 TCTGGACTCCTACTTCTTCCCAC-TGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCAC 183293 |||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 183294 AGCTTTTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAA 183353 | | || || || ||||| || || || | || ||| || |||||||| ||| Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 183354 CTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACT 183413 ||| || || |||| || || ||||| | |||| |||| || || ||||| | || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 183414 TTGGGGTCCTGAGTCTCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAA 183473 |||||| || || | ||||| ||||| ||| ||||| |||||||| ||| | |||| Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 183474 TTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACT 183533 || || || || ||||| || |||| | || || || |||||||| || |||||| | Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 183534 TGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 183593 |||||| | || ||||| ||||| || ||||| ||||| | || |||||||| Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 183594 TTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAG 183653 ||||| |||||||||||| || ||||| || || || |||||||||||||| Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 183654 TTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGAC 183713 || || ||||| | ||| || | || | | ||| | || ||||||||||||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 183714 GTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGC 183773 | ||||| ||||| ||||||||||| |||||| |||| || | |||||| || |||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 183774 TATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATT 183833 || || || | || |||||||| ||| | | |||||||| || |||||||||| Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATT 61830 Query 183834 CAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTT 183893 | ||||| | | ||||||| ||||||||| || || ||||| || || || ||||| Sbjct 61829 CCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTT 61770 Query 183894 CTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTT 183953 ||||||||| || ||||| || || || || ||||||||| | |||||||| ||| | Sbjct 61769 CTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCT 61710 Query 183954 GTTTGTTCCTGTCA-TGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTA 184012 || || ||||| | ||||| | ||| | || | |||| | | || | || |||| Sbjct 61709 CTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTA 61651 Query 184013 ATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTG 184072 | || ||||| || || || ||| ||||||||| | || ||||||||||| || || | Sbjct 61650 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCG 61591 Query 184073 AGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTT 184132 | || |||||||| |||||||| |||||||| |||||| | ||||||||| | ||| || Sbjct 61590 AAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTC 61531 Query 184133 CTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTC 184192 ||||| || ||||| || || |||| || ||||||||| | || | || || |||| Sbjct 61530 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 61471 Query 184193 TTTGAT 184198 ||| || Sbjct 61470 TTTAAT 61465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611695839429800