Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq21 755 0.0 >seq21 Length=72700 Score = 755 bits (836), Expect = 0.0 Identities = 761/981 (78%), Gaps = 14/981 (1%) Strand=Plus/Minus Query 164773 TGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCC 164832 ||| | ||||| || | |||||| | || |||| ||||||||||| | |||||||| Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 164833 TGTTTGCTCGCCGCTACAATTTGTTTTATTACT-GCATTCATCGCTGCTCCCCCTGTGGA 164891 || | | ||||| | ||| || | | ||||||||||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 164892 CATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTC 164951 ||| |||||||||||||| || || | || || || |||||||| |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 164952 TGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGC 165011 ||||||||| ||||| | || ||||| ||||||||||||||||| || || |||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 165012 TGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTT 165071 || || | ||||| ||| | ||||||||||| ||||||||| | | || | ||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 165072 CCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTAT 165131 | ||||||| ||| || |||||||||||||||||||| || || | ||| | || || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 165132 GCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCT 165191 |||||||||||| ||||| || || ||||| || ||||| | ||||| ||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 165192 GGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTAC 165251 | || || |||| || || ||||||||| ||||||||||||||||| ||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 165252 TTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACAT 165311 ||| |||| ||| |||| ||||| || || || ||||| |||||||| || |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 165312 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGT 165371 ||| || || ||||| ||||||||||| || ||||||||||||||||| || || || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 165372 TACTTCCTCACTCGTCCGCGAGACAACTGA-AACAGAGAGTCAG--AACTACGGTTATAA 165428 ||||| ||||| |||| || || ||||| ||| || |||| ||| || || || Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAAC---GAATCAGCTAACGCAGGATACAA 53402 Query 165429 GTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCT 165488 ||| ||||||||||||||||| || ||||| || ||||| ||||| |||||||| ||||| Sbjct 53401 GTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCT 53342 Query 165489 CATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATG 165548 || ||||||||||| || |||||||| || ||||| || |||||||||||||| || Sbjct 53341 TATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTG 53282 Query 165549 GCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAA 165608 ||||||| | || ||||||||||| ||||||||| || || ||||| |||||||| || Sbjct 53281 GCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAA 53222 Query 165609 CGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAA---ATCATCCCTACTTG 165665 ||| ||||||||||||||||| | || ||| ||| ||| | | ||| || || Sbjct 53221 CGGATTCAACTTCAACCAGTCAGTGGTAGAT--TCA-AACGGACGTGTGATCAACACATG 53165 Query 165666 GGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCA 165725 |||||| || | ||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct 53164 GGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCA 53105 Query 165726 CAACTTCCCCCTCGACCTCGC 165746 ||||||||| || |||||||| Sbjct 53104 CAACTTCCCACTTGACCTCGC 53084 Score = 576 bits (638), Expect = 2e-159 Identities = 748/1026 (73%), Gaps = 6/1026 (1%) Strand=Plus/Minus Query 166155 GGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGG 166214 || |||||||| | | || ||||||||||| || || |||||||| || || |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 166215 TCTGGACTTCTTCTTCTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGAC 166273 ||||||||| || || |||||| ||| || |||| |||| || ||||| ||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 166274 TACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCTGGA-GGGTGCAA 166332 || ||||| || ||||| || || || | ||||| || || || ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 166333 ACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTC 166392 ||| || ||| | ||||| || || ||| || | || |||| || || || ||||| | Sbjct 62309 -CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 166393 TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGG 166452 | ||||| || || || ||||| || ||| | ||||| |||||||| || | ||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 166453 CCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAA 166512 | || || ||||| ||||| || |||| |||| || || |||||||| || ||||||| Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 166513 TCGCTCGTCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTG 166572 | |||||| |||| |||||||| ||||| || || || || || | || ||||||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 166573 TCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCAT 166632 | || || ||| || || || ||||| || || ||||| ||||||| || || |||| Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 166633 CTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGA 166692 | || || || | | ||| ||||| || | |||||| | ||||| ||||||||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 166693 CACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTG 166752 |||| |||||||| || |||||||| ||||| ||| | ||||||| ||| | |||| || Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 166753 CCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTT 166812 | || || || | || ||||||||||| || | |||||||||| |||| || | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 166813 TCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCT 166872 || |||||| || | ||||||| ||||| || || |||||||| || || ||||| | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 166873 ATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGC 166932 ||||| ||||| |||||| | || || || ||| | ||| | || ||||| |||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 166933 TGTTTGTTCCTGTTA-TGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTC 166991 | || || ||||||| ||||| | |||| | | || | | || | || || Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 166992 AACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTT 167051 ||||| ||||| || ||||| || || ||||| | | || ||||| ||||||||||| Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 167052 GAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACT 167111 ||||| ||||| || ||||||||||| | || || || || ||| | ||||||||| || Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCT 61532 Query 167112 ATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCT 167171 ||||| |||||||| | | ||||||||||| ||||| ||||| | || |||||| Sbjct 61531 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 61472 Query 167172 CTCTAA 167177 || ||| Sbjct 61471 CTTTAA 61466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563660652039040