Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq21 720 0.0 >seq21 Length=72700 Score = 720 bits (798), Expect = 0.0 Identities = 731/949 (77%), Gaps = 6/949 (1%) Strand=Plus/Minus Query 169732 GGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAAC--CTGCTTT-ATC 169788 || ||||||||||| || |||||||| | |||| | |||| || ||| || ||| Sbjct 54024 GGATGGTTCGGTGTATTAATGATCCC---TACATTATTAACAGCTACTTCTGTATTCATC 53968 Query 169789 GTTGCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGT 169848 || || |||||||||||||| || |||||||||||||| || | || || ||| | || Sbjct 53967 GTAGCATTCATCGCAGCTCCTCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGA 53908 Query 169849 TCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATC 169908 ||| | ||||| || |||||||||||||||||||| || ||||| | |||||||| ||| Sbjct 53907 TCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATC 53848 Query 169909 GGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGT 169968 || || |||||||| || || ||||||||||| || || ||||||||| | || |||||| Sbjct 53847 GGACTTCACTTCTACCCAATCTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGT 53788 Query 169969 GGTCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGA 170028 || ||||| || | | | | |||||| | |||||| | | | | ||||||||| | Sbjct 53787 GGACCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGT 53728 Query 170029 CAGTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCT 170088 ||||||| || |||| ||||||||| ||||||||||||||| |||||| || |||||| Sbjct 53727 GAGTGGGAGCTTTCATTCCGTTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCT 53668 Query 170089 CCAGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCA 170148 || || |||| ||| || |||||| | | || || |||| |||||||||||||| Sbjct 53667 CCTGTAGCAGCTGCAACTGCAGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCT 53608 Query 170149 GACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAG 170208 ||||| |||||||| ||||| || || || || ||||||||| |||||||||| || ||| Sbjct 53607 GACGGTATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAG 53548 Query 170209 CACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCA 170268 |||||||| ||||||||||||||||| ||| || || |||||| | ||||| || || Sbjct 53547 CACAACATCCTTATGCACCCATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCA 53488 Query 170269 CTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGAT 170328 || ||||| || |||||||||||||| ||||| ||||| || ||| | || || || || Sbjct 53487 CTTTTCTCTGCTATGCACGGTTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAG 53428 Query 170329 AACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTT 170388 ||||| ||| ||| |||||||| ||||||||||||||||| || ||||||||||| Sbjct 53427 AACGAATCAGCTAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTA 53368 Query 170389 GCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGT 170448 || || || || ||||| || | |||||||||||||| ||| || ||||| ||| Sbjct 53367 GCTGCTCACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGT 53308 Query 170449 AGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGT 170508 || ||||||||||| |||| | |||||| | | |||||||| || | | ||| Sbjct 53307 TCACTCCACTTCTTCCTCGCTATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGT 53248 Query 170509 ATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGA 170568 |||| || ||||| || |||||||| ||||| ||||||||||||||| | |||||| | Sbjct 53247 ATTTCTACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCA 53188 Query 170569 TCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAA 170628 || || | |||||||| || || | ||| | || ||||| ||||||||| Sbjct 53187 AACGGACGTGTGATCAACACATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAA 53128 Query 170629 GTAATGCATGAGCGTAATGCACACAACTTCCCACTTGACTTGGCAACTG 170677 |||||||| |||||||| || |||||||||||||||||| | ||| ||| Sbjct 53127 GTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTCGCATCTG 53079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582847847002400