Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq12 145 2e-29 seq7 145 2e-29 seq17 138 3e-27 seq16 136 9e-27 >seq12 Length=1122692 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | || || |||||||| || |||||||| || ||||||||||| || Sbjct 916956 CAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTC 917015 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||| ||||| ||||| || | ||| || ||||| || |||||||| || ||||| Sbjct 917016 TTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC 917075 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||||||| || ||||| || || |||||||| || ||||| || || | || Sbjct 917076 TTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGACTTCGAGCGTGATGGT 917135 Query 195108 CTTTCCTGTCAAAGTTTT 195125 || || ||||||||||| Sbjct 917136 TTTCCCAGTCAAAGTTTT 917153 >seq7 Length=519835 Score = 145 bits (160), Expect = 2e-29 Identities = 137/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 ||||||||||||||||| || ||||| || | ||| | || ||||| | ||| || || Sbjct 260389 GTGGACTCTTTTTGAATGTTATAATCCGCCAAAGTGCGTCCGTCTTCTAACTGTTTCCCG 260448 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | || || ||||| ||||| |||||||| |||||||| ||||| |||| Sbjct 260449 GCGAAGATCAACCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATTTTCGCCTTG 260508 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 ||||| || ||||||||||| ||||||||| | ||| | ||| || || |||| Sbjct 260509 ACGTTGTCGATGGTGTCCGAGGATTCCACTTCCAAGGTGATCGTTTTGCCCGTCA 260563 >seq17 Length=937610 Score = 138 bits (152), Expect = 3e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | ||||| ||||||||||| || || ||||| | ||||| ||||| Sbjct 351339 CAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGCTAAAGTTCGGCCATC 351398 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | || || || |||||||| | ||| || || || || || ||||| |||||||| Sbjct 351399 TTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCGGGATGCCCTCTTTGTC 351458 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| ||||| ||||||||| || || ||||||||| || ||||| ||||| | ||| Sbjct 351459 TTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCGACTTCGAGGGTGATCGT 351518 Query 195108 CTTTCCTGT 195116 ||| || || Sbjct 351519 CTTGCCCGT 351527 >seq16 Length=955652 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | || ||||| || || || ||||||||||| | ||||| || || Sbjct 707300 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 707359 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||||||| ||||| || | ||| || || || || || || ||||| ||||| Sbjct 707360 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTC 707419 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || ||||||||| || |||||||| ||| || ||||| | || | || Sbjct 707420 TTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGT 707479 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||||||| || ||||| | |||||| Sbjct 707480 TTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | || ||||| || || || ||||||||||| | ||||| || || Sbjct 707528 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 707587 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||||||| ||||| || | ||| || || || || || || ||||| ||||| Sbjct 707588 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTC 707647 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || ||||||||| || |||||||| ||| || ||||| | || | || Sbjct 707648 TTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGT 707707 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||||||| || ||||| | |||||| Sbjct 707708 TTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | || ||||| || || || ||||||||||| | ||||| || || Sbjct 707756 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 707815 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||||||| ||||| || | ||| || || || || || || ||||| ||||| Sbjct 707816 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTC 707875 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || ||||||||| || |||||||| ||| || ||||| | || | || Sbjct 707876 TTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGGT 707935 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||||||| || ||||| | |||||| Sbjct 707936 TTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481301480107