Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq17 87.8 1e-12 seq12 86.0 4e-12 >seq17 Length=937610 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/212 (70%), Gaps = 12/212 (6%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC--CG 34812 || || | ||| | ||| |||||||| | ||| |||||| |||||||||||||| | Sbjct 351325 CCGCCGCGCAAACGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGCT 351384 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| |||| |||| || | ||||||||||| || || | ||| ||||| || ||| Sbjct 351385 AAAG--TTCGGCCATCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCG 351442 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCC 34928 | | ||||| ||||| || ||| ||||| | | ||||| | ||| | | Sbjct 351443 GGATGCCCTCTTTGTCTTGGATTTTCGCCTTGAC----GTTGTCGATAGTGTCCGAAGAC 351498 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || |||| ||| || || || |||||||| Sbjct 351499 TCGACTTCGAGGGTGATCGTCTTGCCCGTGAG 351530 >seq12 Length=1122692 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | ||| | ||| |||||||| | || |||||| || ||||| || |||| Sbjct 916942 CCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCG 917001 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | || || | |||||| ||||| || || | ||| |||||||| |||| Sbjct 917002 AGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGA 917061 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||| ||| ||| ||| | |||| || || ||| || Sbjct 917062 ATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGACT 917121 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| || |||||||| || || | ||| || Sbjct 917122 TCGAGCGTGATGGTTTTCCCAGTCAAAGTTTT 917153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633516914088