Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 2e-11 >seq16 Length=955652 Score = 84.2 bits (92), Expect = 2e-11 Identities = 346/544 (64%), Gaps = 4/544 (1%) Strand=Plus/Minus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || || ||||| || || | || ||||||| ||| ||||| || || ||||| || ||| Sbjct 698029 CAGGCGAAATCGCAGTGCAACCCTTCGTCTCGACTGATCAACTCGTTGGAAAACGTCAAA 697970 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGA--AGCAAATGATCCAGAAAAGA 19078 || ||||| |||||| || |||| ||| || || | || || || | ||| || Sbjct 697969 CCTTTCATCAATCCTCTCTTCTTTAGCCAAAAGATGGCGCAGAAACTGCCGCTGAA--GA 697912 Query 19079 ATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTAT 19138 | || ||||| || ||| ||| | |||| | ||| || | || || | | Sbjct 697911 AAATGCCTTCCACGCATGCGAAACCGACTAAACGTTCGGCAAACCTCGCCGACGAAGACT 697852 Query 19139 GAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAAT 19198 |||||||||| |||||||| ||||||||||| || ||| || || | || | Sbjct 697851 CGATCCATTTCATCGCCCAATCCGCCTTCTTTTTCACGGTTGGAATCGTATGAATCGCTC 697792 Query 19199 TAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACA 19258 ||| | || | || | || ||||| || || | |||| ||| || |||| Sbjct 697791 GAAACAAATTTCTCTTCTGAATTGGGTCTTTCACGTACGTCTCTAACAACAACGCGTACG 697732 Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318 |||| |||||||| || || | |||||| ||||||| ||| || || | | Sbjct 697731 TTTCGCTGTGAATATTCTCGATGGATTGCTGAAACGCGTAAAACGCTCTCGCCTCGGGAA 697672 Query 19319 TCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTG 19378 ||| | || | ||| | || ||||| || || || || || || | Sbjct 697671 CCTGAATCTCTTTCATAAACCGCACGCATAAATTCTCCAAGACGATACCGTCCGAGGCGG 697612 Query 19379 CAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAAT 19438 | ||||| || || || || | |||||||||| || | | | || || |||||| Sbjct 697611 CGAAAAACGCCAAAACGTGCGTGATAAAATGTTGCTCGTTCTCGTTCAACGTGATCCAAT 697552 Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498 | | ||| | | ||||| | || || | |||||||| ||||| ||||| | Sbjct 697551 CTCTGTAATCGTACGTCAAATCAATCTCCTCCGCGGTCCAAAAGCTCGCCTCCGCTTTCT 697492 Query 19499 TATA 19502 |||| Sbjct 697491 TATA 697488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108652446440