Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq21 621 1e-173 >seq21 Length=72700 Score = 621 bits (688), Expect = 1e-173 Identities = 709/950 (75%), Gaps = 8/950 (1%) Strand=Plus/Plus Query 35968 CAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 36027 ||| ||| |||||||||||||||||||| ||||||||||| ||||| |||||||| || | Sbjct 53079 CAGATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAA 53138 Query 36028 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 36087 || |||||||| | ||| |||||||| || || || | |||||| ||||| || | Sbjct 53139 GGTTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCA 53198 Query 36088 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 36147 ||||||| |||||||| || ||||| || || ||||||||||| || | || | ||| | Sbjct 53199 CTGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTG 53258 Query 36148 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTA---AAC-TGCGGCTA 36203 | | ||| || | | || ||||| ||| |||||||| || | ||| || | Sbjct 53259 TGAACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAG---- 53314 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || || || ||| || |||||||| || | || ||||| || ||||| || |||||| Sbjct 53315 TTGTTGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATG 53374 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 || || |||||||||||||| ||||| || ||||| ||| ||||| | |||| Sbjct 53375 TTGTAAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTA 53434 Query 36324 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 36383 |||||||| |||||||| ||||| || || ||||||||||||| ||| | | ||| Sbjct 53435 GTTTCACGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCA 53494 Query 36384 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 36443 |||||||| || || || || ||||| ||||| || ||||||||||| ||||| || ||| Sbjct 53495 CCGAATACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCC 53554 Query 36444 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 36503 || || || | ||| || |||||||| || |||||||||||||||||||| ||||||||| Sbjct 53555 TGGAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAA 53614 Query 36504 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 36563 || ||||| | ||||| | | |||||| ||| ||| ||||| ||||| || || Sbjct 53615 GATCCCTGTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAG 53674 Query 36564 TAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 36623 ||||||||| ||||| || | ||| |||| | | ||| ||||| | || ||| Sbjct 53675 TAAGCTACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCC 53734 Query 36624 AAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 36683 | ||| | | | || |||| ||||| | || || || || || ||||| ||||| Sbjct 53735 ATGTATGAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTG 53794 Query 36684 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 36743 || | |||||| || || || || |||||||||||||||||||||||||| ||||| ||| Sbjct 53795 TAAAGCCACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCG 53854 Query 36744 TTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 36803 || |||| || || | || |||||||||||||||||||| || | | || ||| || Sbjct 53855 TTTGATGTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGAT 53914 Query 36804 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 36863 || ||||||||||||||||| || ||||| ||||| || || | ||||| | | ||| Sbjct 53915 ACTGGCTCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAAT 53974 Query 36864 GCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCC 36913 | | |||||||| | || ||||||||||| ||| || ||||| || Sbjct 53975 ACAGAAGTAGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCC 54024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150454362480434