Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq21 603 3e-168 >seq21 Length=72700 Score = 603 bits (668), Expect = 3e-168 Identities = 706/949 (74%), Gaps = 6/949 (1%) Strand=Plus/Plus Query 5190 CAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAA 5249 ||| ||| || |||||||||||||||||||| || || |||||||||||||||||||||| Sbjct 53079 CAGATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAA 53138 Query 5250 GGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGA 5309 |||| |||||||| | | ||| ||||| ||| | | | ||| | || || || | Sbjct 53139 GGTTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCA 53198 Query 5310 CTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGG 5369 ||||||| |||||||| || |||||||| || ||||||||||| || || || | || | Sbjct 53199 CTGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTG 53258 Query 5370 TAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGT 5429 | | ||| || | | || ||||| |||| |||||||| || | ||| |||| Sbjct 53259 TGAACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 53318 Query 5430 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 5489 | || ||| || |||||||| || | || ||||| || ||||| || |||||||| | Sbjct 53319 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGT 53378 Query 5490 ACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTT--CTGAGAAGTAAGCCCAGTTGT 5547 | || ||||| ||||| ||||| || ||||| ||| |||| || | |||| || Sbjct 53379 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTT--CTCAGTAGT 53436 Query 5548 TTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACC 5607 |||||| || || |||||||| || || || |||||||||| ||| | | ||||| Sbjct 53437 TTCACGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACC 53496 Query 5608 GAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 5667 |||||| ||||| || || ||||||||||| || ||||||||||| ||||| || ||||| Sbjct 53497 GAATACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTG 53556 Query 5668 GAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACT 5727 |||||||| ||| ||||| ||||| ||||| ||||||||||||||||| ||| |||| Sbjct 53557 GAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGA 53616 Query 5728 TCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAAT 5786 ||||||||||| ||||| | | ||||||| ||| || || || || || || || | Sbjct 53617 TCCCTGTCCGATTGGGTAAATGATGAATACTGCAGT-TGCAGCTGCTACAGGAGCAGAGT 53675 Query 5787 ATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCA 5846 | ||||| ||||| || ||||||||||| | | | ||| ||||| | || |||| Sbjct 53676 AAGCTACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCA 53735 Query 5847 AGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGT 5906 ||| | | || || | |||||| | |||| || ||||| ||||| || |||| Sbjct 53736 TGTATGAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGT 53795 Query 5907 AAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGT 5966 ||||||| ||||| || | |||||||||||||| || |||||||| | || || |||| Sbjct 53796 AAAGCCACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGT 53855 Query 5967 TGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGA 6026 | || | || || || || || || |||||||||||||| || | || ||||| | | Sbjct 53856 TTGATGTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATA 53915 Query 6027 CGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATG 6086 | || ||||| || || |||||||| ||||| || || || | |||||||| || ||| Sbjct 53916 CTGGCTCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATA 53975 Query 6087 CAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCC 6135 ||| ||| || ||||| | || || |||||||| ||||| ||||| || Sbjct 53976 CAGAAGTAGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCC 54024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152649561933006