Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq21 628 8e-176 >seq21 Length=72700 Score = 628 bits (696), Expect = 8e-176 Identities = 707/946 (75%), Gaps = 0/946 (0%) Strand=Plus/Plus Query 25448 CAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 25507 ||||||| | |||||| ||||||||||| ||||||||||| ||||| |||||||| || | Sbjct 53079 CAGATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAA 53138 Query 25508 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 25567 || |||||||| | ||| |||||||| || || || | |||||| ||||| || | Sbjct 53139 GGTTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCA 53198 Query 25568 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 25627 ||||||| |||||||| || ||||| || || ||||||||||| || | || | ||| | Sbjct 53199 CTGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTG 53258 Query 25628 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTAT 25687 | | ||| || | | || ||||| ||| |||||||| || | ||| || | Sbjct 53259 TGAACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 53318 Query 25688 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 25747 | || ||| || |||||||| || | || ||||| || ||||| || |||||||| | Sbjct 53319 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGT 53378 Query 25748 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 25807 | |||||||||||||| ||||| || ||||| ||| ||||| | |||| |||| Sbjct 53379 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTT 53438 Query 25808 CACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 25867 |||| |||||||| ||||| || || ||||||||||||| ||| | | ||||||| Sbjct 53439 CACGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGA 53498 Query 25868 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAA 25927 |||| || || || || ||||| ||||| || ||||||||||| ||||| || ||||| | Sbjct 53499 ATACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 53558 Query 25928 AGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCC 25987 | || | ||| || |||||||| || |||||||||||||||||||| ||||||||| | Sbjct 53559 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATC 53618 Query 25988 CTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAG 26047 | ||||| | ||||| | | |||||| ||| ||| ||||| ||||| || || |||| Sbjct 53619 CCTGTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAGTAAG 53678 Query 26048 CTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGT 26107 ||||| ||||| || | ||| |||| | | ||| ||||| | || |||| || Sbjct 53679 CTACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCATGT 53738 Query 26108 AAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACA 26167 | | | | ||||||| ||||| | || ||||| || || ||||||||||| || | Sbjct 53739 ATGAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGTAAA 53798 Query 26168 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAG 26227 |||||| || || || || |||||||||||||||||||||||||| ||||| ||||| | Sbjct 53799 GCCACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTTG 53858 Query 26228 ATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAG 26287 ||| || || | || || ||||||||||||||||| || | | || ||| || || | Sbjct 53859 ATGTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 53918 Query 26288 GCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTG 26347 |||||||||||||||| || ||||| ||||| || || | ||||| | | ||| | | Sbjct 53919 GCTCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATACAG 53978 Query 26348 TCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCC 26393 |||||||| | || ||||||||||| ||| || ||||| || Sbjct 53979 AAGTAGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCC 54024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151993562096596