Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq16 107 1e-18 seq12 107 1e-18 seq7 89.7 4e-13 >seq16 Length=955652 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 48534 TCGTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAA 48593 || |||||||| | || ||||||||||| || | ||| ||| || || || |||||| Sbjct 707280 TCTTCGCCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAA 707339 Query 48594 TCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCC 48653 || | | ||| |||| || |||||||||||||| || |||| |||||| |||||| Sbjct 707340 TCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCC 707399 Query 48654 GTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCC 48713 | || | || |||||||| ||||| || || | | | || || | | Sbjct 707400 GGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGAC 707459 Query 48714 TCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || |||| ||| || ||||| || |||||||| || || || || |||||| Sbjct 707460 TCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCATC 707513 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| || | ||||||||||| || | ||| ||| || || || |||||||| | Sbjct 707514 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707573 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | ||| |||| || |||||||||||||| || |||| |||||| ||||||| || Sbjct 707574 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707633 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||| || || | | | || || | ||| || Sbjct 707634 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 707693 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| ||| || ||||| || |||||||| || || || || |||||| Sbjct 707694 TCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCATC 707741 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| || | ||||||||||| || | ||| ||| || || || |||||||| | Sbjct 707742 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707801 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | ||| |||| || |||||||||||||| || |||| |||||| ||||||| || Sbjct 707802 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707861 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||| || || | | | || || | ||| || Sbjct 707862 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACT 707921 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| ||| || ||||| || |||||||| || || || || |||||| Sbjct 707922 TCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCATC 707969 >seq12 Length=1122692 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 ||||||| | | ||||||||||| || | || |||||||| || |||||||| | Sbjct 916940 CGCCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCG 916999 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 ||| ||| |||| || ||||| |||||||| || |||| |||||| || |||| | Sbjct 917000 CGAGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCG 917059 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 ||| |||||||||||| ||| || ||| || | | | || || | ||| | Sbjct 917060 GAATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGA 917119 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTT 48751 | || | ||| || ||||| || ||||||||||| Sbjct 917120 CTTCGAGCGTGATGGTTTTCCCAGTCAAAGTTTT 917153 >seq7 Length=519835 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| || || || |||||||| |||| |||| |||||||||||| || ||||| | Sbjct 260359 CCGCCTCTCAGGCGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCC 260418 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | || |||| || ||||| || ||||| || |||| ||||| || || | || Sbjct 260419 AAAGTGCGTCCGTCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGG 260478 Query 48660 ACGCCCTCCTTGTC 48673 | ||| |||||||| Sbjct 260479 ATGCCTTCCTTGTC 260492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937502503783