Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq21 814 0.0 >seq21 Length=72700 Score = 814 bits (902), Expect = 0.0 Identities = 765/974 (79%), Gaps = 0/974 (0%) Strand=Plus/Minus Query 162508 TGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCT 162567 ||| |||| ||| ||| || || | || |||| ||||||||||| || ||||||||| Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 162568 TGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGAT 162627 || | |||| | || |||||| | |||||||| ||||| |||||||| || Sbjct 53997 ACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGAC 53938 Query 162628 ATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCT 162687 ||||||||||| | || || || | || |||||| | || || ||||||||||||||| Sbjct 53937 ATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 53878 Query 162688 GGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCA 162747 |||||||| ||||||| ||||| ||||| || ||||||||||| || |||||||||||| Sbjct 53877 GGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 53818 Query 162748 GCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTC 162807 || || |||||||||||| | || || |||||||||| ||| ||| | || | |||||| Sbjct 53817 GCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTTC 53758 Query 162808 CTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATG 162867 | |||||| | ||||| |||||| ||||||| ||||| | ||| ||||| ||| Sbjct 53757 TTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAATG 53698 Query 162868 CGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTG 162927 |||||||||||| ||| || |||||||| || ||| | || ||| || || ||| | Sbjct 53697 CGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCATC 53638 Query 162928 GTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACT 162987 | || || |||| || || ||||||||||||| |||||||||||||||||||| ||| Sbjct 53637 ATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAACT 53578 Query 162988 TTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATG 163047 || |||| |||| |||| ||||| || |||||||||||||| |||||||| ||||| ||| Sbjct 53577 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 53518 Query 163048 ATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTT 163107 ||||||| || |||||||||||||||||||| || ||||||||||||||| || || Sbjct 53517 CTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGTA 53458 Query 163108 ACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTC 163167 |||||||| |||||| | |||||||||||| | || ||| ||| || || |||||| Sbjct 53457 ACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTTC 53398 Query 163168 GGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATC 163227 ||||||||||||||||||||||||||||| |||||||| || ||||| || || | ||| Sbjct 53397 GGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTATC 53338 Query 163228 TTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCT 163287 ||||| || || || |||||||||||||||||||| ||||||||||| ||| | ||| Sbjct 53337 TTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCCT 53278 Query 163288 GTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGT 163347 || | | ||||||||||| || | ||| | || |||||||| |||||||||||||| Sbjct 53277 GTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGGA 53218 Query 163348 TTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGAT 163407 |||||||||||||| || || || || || || ||||| || ||||| ||| Sbjct 53217 TTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGAT 53158 Query 163408 ATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 163467 || | ||| | || |||||||||||||| |||||||||||||| |||||||||||| Sbjct 53157 ATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 53098 Query 163468 CCACTTGACCTTGC 163481 ||||||||||| || Sbjct 53097 CCACTTGACCTCGC 53084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553084654815240