Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq21 742 0.0 >seq21 Length=72700 Score = 742 bits (822), Expect = 0.0 Identities = 751/975 (77%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 162901 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162960 ||| | ||||| || | ||||| | || |||| |||||||| ||| | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 162961 ACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 163019 || | || |||| ||| ||||| |||||||| || ||| |||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 163020 CATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTC 163079 ||| || || || |||||||| || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 163080 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 163139 |||||| || ||||| | || ||||| || || ||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 163140 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 163199 || |||||||||||||||| || |||||||| |||| ||| || | || | |||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 163200 CCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTAT 163259 | | ||||| | | | |||| ||||| ||||| ||||| ||||||| || ||||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 163260 GCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCT 163319 ||| || |||||| |||||| |||||||| ||||| ||||| ||| | ||||| ||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 163320 GGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCAC 163379 | || || |||| || || ||||||||||||| ||||| ||||| || ||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 163380 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 163439 ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| || Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 163440 GTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGT 163499 | | ||||| |||||||| |||||||| ||||| ||||| || ||||| || || || Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 163500 TACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTT 163559 || |||||||| ||||||| || ||||| | || ||| ||| || |||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 163560 TGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGAT 163619 || |||||||||||||| |||||||| || || || || || |||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 163620 CTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCC 163679 ||||||||| || |||||||||||| | || ||||||||||| || ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 163680 TGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 163739 ||| | ||||||||||| || || || || | || ||||| |||||||| ||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 163740 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGA 163799 ||||||||||||||||| | | ||| | || |||||| ||||||| ||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 163800 CGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 163859 | | ||||| ||| || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 53099 Query 163860 CCCACTCGATCTTGC 163874 |||||| || || || Sbjct 53098 CCCACTTGACCTCGC 53084 Score = 542 bits (600), Expect = 3e-149 Identities = 739/1026 (72%), Gaps = 4/1026 (0%) Strand=Plus/Minus Query 164601 GGGTGGTTCGACATCCTAGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGG 164660 || |||||||||| | |||||||||||||||| || || || || || || || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 164661 TCTGGATTACTACTTCTTCCCAC-TGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCAC 164719 |||||| | || || |||||| ||| || | || |||| || ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 164720 AGCTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAA 164779 | | || || || |||||||| || ||| | || ||| || |||||||| ||| Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 164780 CTTTCTCACAGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 164839 ||| ||||| |||| || || ||||| | | || |||| || || |||||||| || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 164840 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAA 164899 |||||| || || | || || | ||| || ||||| |||||||| ||| |||||| Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 164900 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCT 164959 ||||| ||||| ||||| || || | |||| || || ||||| || || ||||| | Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 164960 GGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 165019 || ||| | || ||||| ||||| || ||||| ||||| | || |||||||| Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 165020 TTTTGTCAGCGTCTTCCTTATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTC 165079 ||||| || |||||||| |||||||| || || || ||||||| || || || || Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 165080 CTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGAC 165139 ||||| || || | ||| || | || | | ||| | ||||| |||||||||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 165140 CCTCAACCCCTTCCATATGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGC 165199 || ||||| ||||| |||||||| || || ||| | | || | |||| | || | ||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 165200 TATTCATGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTT 165259 ||||| |||| || || || || ||| | | ||| ||||| || |||| || || Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATT 61830 Query 165260 TAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTT 165319 || || | | || || | |||||||||||| || ||||| || || ||||| || Sbjct 61829 CCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTT 61770 Query 165320 CTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTT 165379 |||||| ||||| ||||| | || || || |||||||| |||||||| || |||||| | Sbjct 61769 CTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCT 61710 Query 165380 GTTTGTGCCTGTTA-TGGGTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCA 165438 || || ||||||| ||||| | |||| || | |||| | | || | || || | Sbjct 61709 CTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTA 61651 Query 165439 ACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTG 165498 |||| ||||| ||||| ||||| || |||||| | || ||||||||||| || || | Sbjct 61650 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCG 61591 Query 165499 AGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTG 165558 | || |||||||| || ||||| || | || |||||| | ||||| ||| ||||| || Sbjct 61590 AAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTC 61531 Query 165559 CTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCC 165618 ||||| || ||||||||| || | ||||| || || ||| | || | || ||||| | Sbjct 61530 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 61471 Query 165619 TTTAAT 165624 |||||| Sbjct 61470 TTTAAT 61465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563209452157480