Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq21 753 0.0 >seq21 Length=72700 Score = 753 bits (834), Expect = 0.0 Identities = 762/992 (77%), Gaps = 0/992 (0%) Strand=Plus/Minus Query 8239 TGGGAAAATTTTTGCGAATGGGTCACTTCGACCAATAATCGCTTGTATGTCGGCTGGTTT 8298 |||| | |||||| |||| ||||||| || | || || || || |||| ||||| Sbjct 54075 TGGGGACGTTTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTC 54016 Query 8299 GGCGTTCTCATGATCCCAACCCTTCTTGCCGCTACAATTTGCTTCATTACCGCATTCGTT 8358 || || | |||||||| || | | | ||||| | ||||| |||||| | Sbjct 54015 GGTGTATTAATGATCCCTACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATC 53956 Query 8359 GCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATCTCTCATGTAC 8418 || |||||||| ||||||||||| || || || || ||||| ||||||| || |||||| Sbjct 53955 GCAGCTCCTCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTAC 53896 Query 8419 GGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGGCCTCCACTTC 8478 || |||||||||||||||||||| || ||||| | || ||||| || || || |||||| Sbjct 53895 GGAAACAACATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTC 53836 Query 8479 TACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAG 8538 ||||| ||||||||||| ||| | |||||||||||||| ||||||||||| ||||||||| Sbjct 53835 TACCCAATCTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAG 53776 Query 8539 CTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTT 8598 ||| | || | |||||| || | || || | | | || ||||||||||| ||||| ||| Sbjct 53775 CTTATCGTATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTT 53716 Query 8599 TCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCT 8658 || | ||| | || ||||||||||||||| ||| || |||||||||||||| || ||| Sbjct 53715 TCATTCCGTTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCT 53656 Query 8659 GCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCT 8718 || |||| |||||| | | || || | || || || || |||||||| ||||||||| Sbjct 53655 GCAACTGCAGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCT 53596 Query 8719 CTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTG 8778 |||||||| || || || ||||||| ||| | || ||||||||||||||||||||||| Sbjct 53595 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 53536 Query 8779 ATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCA 8838 |||||||| |||||||||||||| || |||||||| ||||| || || || || || || Sbjct 53535 ATGCACCCATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCT 53476 Query 8839 ATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAA 8898 ||||| ||||||||||| |||||||| || | ||||| || || || | ||| || Sbjct 53475 ATGCACGGTTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCT 53416 Query 8899 AACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGC 8958 ||| || ||||||||||| |||||||| || |||||||||||||| || ||||| || Sbjct 53415 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGT 53356 Query 8959 TACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTC 9018 ||||| || || | ||||||||||| || || || ||||| || | | || ||| Sbjct 53355 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 53296 Query 9019 TTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATG 9078 ||||||||| |||||||| ||||||||||||| || || || || | || || ||| Sbjct 53295 TTCCTCGCTATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATG 53236 Query 9079 GCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTG 9138 ||||||||||| || || ||||||||||||||||| | | || | | ||||| ||| Sbjct 53235 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTG 53176 Query 9139 CTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAA 9198 ||||||| ||||| || | | ||||| || || ||||||||||| |||||||| Sbjct 53175 ATCAACACATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAG 53116 Query 9199 AGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 | ||||| ||||||||||| |||||||| || Sbjct 53115 CGTAACGCTCACAACTTCCCACTTGACCTCGC 53084 Score = 576 bits (638), Expect = 1e-159 Identities = 735/1004 (73%), Gaps = 6/1004 (1%) Strand=Plus/Minus Query 9812 TGGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCT 9871 ||||| |||| | | |||||||||||||| || || || || || || || ||||||||| Sbjct 62485 TGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGGTCT 62426 Query 9872 GGACTACTTCTTTTTCCCAC-TGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTAC 9930 ||||| || || |||||| ||| || ||||| ||||||| ||||||||||| || || Sbjct 62425 GGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAACAAC 62367 Query 9931 GTTTGTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGA-GGGTGCTAATT 9989 || || || |||||||| ||||| | |||||| |||||||| ||||| ||| | Sbjct 62366 ATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TAACT 62308 Query 9990 TCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTT 10049 |||| || | || || |||||||| | | || |||| || || |||||||| |||| Sbjct 62307 TCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCTTT 62248 Query 10050 GGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTT 10109 |||| || || | || || || ||| || ||| || ||||| ||| | ||| | | Sbjct 62247 GGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGACAT 62188 Query 10110 TTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGG 10169 | || || || |||||||| || | |||||||| |||||| | || || ||||| | | Sbjct 62187 TCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAATTG 62128 Query 10170 CGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTT 10229 | | | | ||| || || ||||| || || || || || | || |||||||| | Sbjct 62127 CTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGTGT 62068 Query 10230 TTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTT 10289 |||| ||| ||||| || || ||||| || || || ||||||||||||| || | Sbjct 62067 TTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATCAT 62008 Query 10290 TCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGC 10349 | || || || | |||||||| || |||| ||| |||| || || || || ||||| | Sbjct 62007 TTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGACAC 61948 Query 10350 TCAATCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAA 10409 | || || ||||| ||||||||||| |||||| |||| || | || || || | |||| Sbjct 61947 TTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGCAA 61888 Query 10410 TCCACGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCA 10469 | ||||||| |||||||| |||||||||| ||||||| || ||||||| ||| Sbjct 61887 TTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATTCC 61828 Query 10470 AAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCT 10529 || || | ||||||| ||||||||| || || ||||| || ||||||||||||| Sbjct 61827 GTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTTCT 61768 Query 10530 GGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGT 10589 |||| ||||| || || | ||||| || || || |||||||| ||||| ||||| | Sbjct 61767 GGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCTCT 61708 Query 10590 TTGTACCTGTTA-TGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAAT 10648 | |||||||||| ||||| | |||| || | ||||| | | || | || || || Sbjct 61707 TCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTAAC 61649 Query 10649 CTTCGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAG 10708 || ||||| ||||| || ||||| ||||||||| | || ||||||||||||| || || Sbjct 61648 CTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCGAA 61589 Query 10709 ACGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTT 10768 || ||||| |||||||| || ||||| |||||||| | ||||||||||||||| | Sbjct 61588 ACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTCAA 61529 Query 10769 GACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || || || |||| | |||| ||||| || || || ||||| Sbjct 61528 GATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCC 61485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516479864424000