Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq21 549 6e-152 >seq21 Length=72700 Score = 549 bits (608), Expect = 6e-152 Identities = 694/951 (73%), Gaps = 2/951 (0%) Strand=Plus/Plus Query 17841 TCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTG 17900 || || |||||||| ||||| |||||||||||||| ||||| | ||||||||||| | | Sbjct 53090 TCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAAGGTTAGCACGG 53149 Query 17901 TTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGATTGGTTG 17960 || | | ||||||||||| | || |||| | |||| | || |||||| Sbjct 53150 TTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCACTGACTGGTTG 53209 Query 17961 AAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATG 18020 ||||||||||| || || || ||||||||||| || || || | || || | ||| || Sbjct 53210 AAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTGTGAACCAGATT 53269 Query 18021 CAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAAGCTAGCA 18080 | | || ||||| ||| | |||||| || || | ||||| || ||| Sbjct 53270 CCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAATGAAGCG 53329 Query 18081 TACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCT 18140 || |||||||| || | || ||||| || ||||| || ||||| || || ||||||||| Sbjct 53330 TATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGTAAGTCTCTTCT 53389 Query 18141 TCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTAATAAGT 18200 ||||| || || || ||||| ||| || || |||||| ||||| | |||||| Sbjct 53390 TCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTTCACGGATAAGT 53449 Query 18201 GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCA 18260 || ||||| || || ||||||||||||| ||| | | ||||||||||| || || Sbjct 53450 GAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGAATACACCAGCT 53509 Query 18261 ACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATACGAACATG 18320 || || ||||| ||||| || ||||||||||| ||||| || || |||||||||| |||| Sbjct 53510 ACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACGATCATG 53569 Query 18321 AAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAA 18380 || |||||||| || |||||||||||||||||| ||||||||| || ||||| | Sbjct 53570 AAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATCCCTGTCCGATT 53629 Query 18381 GGATAAACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACACAAATC 18440 || |||| || ||||||| ||||||||||| || || || ||||| ||| ||| Sbjct 53630 GGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAGTAAGCTACAGCGATC 53689 Query 18441 CACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGATG 18500 || || ||||| |||| | | ||| ||||| | || |||||||| | | Sbjct 53690 CAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCATGTATGAACATACT 53749 Query 18501 CCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCG 18560 ||||||| ||||| | || || || || || ||||| ||||| || | |||||| || Sbjct 53750 CCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGTAAAGCCACTCATCA 53809 Query 18561 AGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACG 18620 || || || |||||||||||||||||||||||||| ||||| ||||| |||| || || Sbjct 53810 AGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTTGATGTAGGAACT 53869 Query 18621 ATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAG-GCTCCTGAGACAGGCTCACGAAT 18679 | || || || |||||||||||||| || | |||| | ||| || || ||||||||||| Sbjct 53870 ACAGCACCAGAGATGATGTTGTTTCCGTACA-TAAGTGATCCAGATACTGGCTCACGAAT 53928 Query 18680 ACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGT 18739 |||||| ||||| || |||||||| || | ||||| | | ||| | | || || || Sbjct 53929 ACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATACAGAAGTAGCTGT 53988 Query 18740 TAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTT 18790 ||| | || ||||||||| | ||| || ||||| || | ||| | ||||| Sbjct 53989 TAATAATGTAGGGATCATTAATACACCGAACCATCCGATGTATAAACGGTT 54039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151318362264974