Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq21 726 0.0 >seq21 Length=72700 Score = 726 bits (804), Expect = 0.0 Identities = 747/984 (76%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 103166 TCTGCAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATA 103225 ||| ||| || |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 53075 TCTACAGATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 53134 Query 103226 CCCAGACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCA 103285 || || ||| ||||| | || || ||||| ||||| | |||||| || | ||| Sbjct 53135 CCAAGGTTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCT 53194 Query 103286 AGGATGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGT 103345 | | ||||||||||||||||||||||| |||||||| ||||| || || |||||| Sbjct 53195 ACCACTGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGA 53254 Query 103346 GCGGTGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAG 103405 || ||||||||||| |||| ||| || | ||| Sbjct 53255 GCTGTGAACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAG 53314 Query 103406 TTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATG 103465 ||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||||| ||| Sbjct 53315 TTGTTGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATG 53374 Query 103466 TTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTC 103525 ||||| |||||||| ||||||||||||||||| || ||| ||||| | ||||| Sbjct 53375 TTGTAAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTA 53434 Query 103526 GTCTCACGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCA 103585 || ||||| | || || || || || || ||||||||||||||| ||| ||||||||| Sbjct 53435 GTTTCACGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCA 53494 Query 103586 CCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCT 103645 ||||| || ||||| || || ||||||||||| |||||||| || ||||| || || || Sbjct 53495 CCGAATACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCC 53554 Query 103646 TGGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAAC 103705 ||||| || | |||| ||||||| ||||| |||||||| | ||||||| | || ||||| Sbjct 53555 TGGAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAA 53614 Query 103706 GAACCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAG 103765 || || || || | ||||| | | ||||||||| | ||||| || |||||||||||| Sbjct 53615 GATCCCTGTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAG 53674 Query 103766 TATGCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCC 103825 || || ||| |||||| || ||||| || | |||| | || | ||||||||||| ||| Sbjct 53675 TAAGCTACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCC 53734 Query 103826 ATATATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTA 103885 || |||| | | | || |||| |||||| |||| | ||| ||| |||| |||||||| Sbjct 53735 ATGTATGAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTG 53794 Query 103886 TACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCG 103945 || |||||||||||||| | ||||||||||| || || ||||||||||| || || ||| Sbjct 53795 TAAAGCCACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCG 53854 Query 103946 TTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCG 104005 || || | ||||| || |||||||||||||||||||| |||||||| ||||| |||| Sbjct 53855 TTTGATGTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGAT 53914 Query 104006 ACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA- 104064 || || |||||||| || ||||| || || ||||| ||||| | ||| || |||||||| Sbjct 53915 ACTGGCTCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAAT 53974 Query 104065 GCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAG 104124 |||| || || | || | || |||||||| | ||||||||||| || | || | Sbjct 53975 ACAGA-AGTAGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCCGATGTATAA 54033 Query 104125 ACGGTTGTTTGTCGATGTAACCCA 104148 |||||| | || || || | ||| Sbjct 54034 ACGGTTCTCAGTTGAAGTGATCCA 54057 Score = 603 bits (668), Expect = 1e-167 Identities = 750/1019 (74%), Gaps = 6/1019 (1%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | |||||| ||||| ||||||| ||||||||| || ||||| Sbjct 61470 AGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGAGGCTGATCT 61529 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | ||||| ||||||||| | ||||| || | || |||||||| |||||||| || Sbjct 61530 TGAGCTGCCATCCATGCACGGATTCCTTCGTTAAGAAGAATGTTCTTCGTGTAGAATGTT 61589 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 |||||||| ||||||||||| || | ||||||||| ||||| ||||| || ||||| ||| Sbjct 61590 TCGAACTCAGGATCTTCTGCAGCACGGATCTCTTGTGATACGAAGTCGTATGCACGGAGG 61649 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCA-TAACAGGAACAAA 101948 || || || | || | | || | | |||| | ||||| ||||||| || || Sbjct 61650 TTAAGTGCTAATCCTACTACTCCAAGTGCTGACATCCATA-ACCCAGTAACAGGTACGAA 61708 Query 101949 GAGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCA 102008 |||||| ||||| || | ||| | ||| || || || | ||| || || || ||||| Sbjct 61709 GAGCATGAAGAAGTGAAGCCAACGCTTGTTTGAGAAAGCTACACCGAAAATCTGTGACCA 61768 Query 102009 GAAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTT 102068 ||||||||| || || |||||||| ||||||||||| |||| || | | |||||| Sbjct 61769 GAAACGGTTAGCCGTTACCATTGAGTAAGTCTCTTCTGCTTGAGTTGGGTTGAATGCACG 61828 Query 102069 GAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGAT 102128 ||| ||||||| |||||||||||| | || |||||||| ||||| | ||||| || Sbjct 61829 GAATGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGCTCCGTGAAT 61888 Query 102129 TGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAG 102188 ||| | || |||||| | || || | ||| || || |||||||| ||||||||||| || Sbjct 61889 TGCACAAAGAAGTGCTGCACCGAGTACACCAGCTACTCCCATCATGTGGAATGGGTTAAG 61948 Query 102189 CGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAA 102248 |||||||| ||||| || || | ||| || | || | || || | || |||||||| Sbjct 61949 TGTCCAGTTGTGGAAACCTTGGAAGAAAAGAATAAAACGGAAAATTCCAGCTACACCAAA 62008 Query 102249 CGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAA 102308 || || ||||||||||||| || || || || || || || || || ||| ||||| Sbjct 62009 TGATGGTGCAAAGAACCAACCTGATTGCCCAAGTGGGTAAATAAGGAATACAGATACAAA 62068 Query 102309 AACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGC 102368 ||||| || || | ||||| ||||| || ||||| ||||||||| | | | ||| Sbjct 62069 CACAGCAATTGGTGCTGAGAATGCAATCGCGTTGTATGGACGAATTTGTACTGCACGAGC 62128 Query 102369 CAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAA 102428 | || |||||||||||||| || || || | ||||||| ||||| ||||| || || Sbjct 62129 AATTTCAAATTGACGAAGCATAAATCCGATTAATCCAAATGCTCCGTGAAGAGCTACGAA 62188 Query 102429 AGCCCAGAGTCCCCCAAGTTG-GACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCC 102487 | ||| | ||| |||||||| ||| || || ||| || ||||| ||||| || |||| Sbjct 62189 TGTCCATAATCCACCAAGTTGACACCAACGTG-TGAAGTCACCTTGTGCTTCTGGTCCCC 62247 Query 102488 AAAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGA 102547 |||| |||||||| || || |||| | || | |||||||| || || | || |||| Sbjct 62248 AAAGGAGAAGAAGTGAGTGTGCCATCGCGTTTGATGGCGTTGATACTGCTGAAGTGAGGA 62307 Query 102548 AATTAGCACCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACG 102607 | ||| ||||||||||| | || | ||||| || ||||| ||||| | || | Sbjct 62308 AGTTACACCCTTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAGTTACGAATG 62367 Query 102608 TCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCA-GTGGGAAAAAGAAGTAGTCCA 102666 | || ||||||||||| || |||| ||| | || ||| |||||| || || |||||| Sbjct 62368 TTGTTCCAGTAAGCCATCCACCAAGTGCAAAGTATGCACATGGGAATAATAA-AAGTCCA 62426 Query 102667 GACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAACCA 102725 |||||||| || || || || || || || |||| ||||||||| | | |||| ||||| Sbjct 62427 GACCAACCTACGAATACGAAACGGTCACGCTTAAGCCAGTCATCTACGTTGTCGAACCA 62485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633513433702680