Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq21 661 0.0 >seq21 Length=72700 Score = 661 bits (732), Expect = 0.0 Identities = 744/993 (75%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 21462 TCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAG 21521 || || ||||| |||||||| ||||||||||| ||||| ||||| ||||| || || | Sbjct 53075 TCTACAGATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 53134 Query 21522 CCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCT 21581 |||||||| |||||||| | ||| |||||||| ||||||||||| |||| | | | || Sbjct 53135 CCAAGGTTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCT 53194 Query 21582 AGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGC 21641 | || || ||||| |||||||| || || | |||||||||||| ||||| | ||||| Sbjct 53195 ACCACTGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGA 53254 Query 21642 GCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAA 21701 || | ||||| || || | ||||||||| ||| || ||||| || || ||| || Sbjct 53255 GCTGTGAACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAG 53314 Query 21702 TTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATA 21761 || || || ||| |||||||||||||| || || || || ||||||||||| ||||| Sbjct 53315 TTGTTGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATG 53374 Query 21762 TTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTC 21821 |||||||||||||| ||||| || |||||||| || ||| ||| | | ||||| Sbjct 53375 TTGTAAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTA 53434 Query 21822 GTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCA 21881 || ||||| || ||||| || || || || |||||||||||||||||| | ||| Sbjct 53435 GTTTCACGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCA 53494 Query 21882 CCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCC 21941 || ||||| || || || || |||||||| || || |||||||| || |||||||||||| Sbjct 53495 CCGAATACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCC 53554 Query 21942 TGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAA 22001 ||||| || | |||| ||||||| || || || || || | |||||| | ||||| ||| Sbjct 53555 TGGAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAA 53614 Query 22002 GAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAG 22061 || |||||||| | || |||| | ||| || ||||| ||||| || |||||||||||| Sbjct 53615 GATCCCTGTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAG 53674 Query 22062 TACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCC 22121 || || ||| |||||| || | ||| |||| || | ||| |||||||| || ||| Sbjct 53675 TAAGCTACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCC 53734 Query 22122 ATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTG 22181 ||||| | | | || || |||| |||||| ||||| | || ||| | || || |||||| Sbjct 53735 ATGTATGAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTG 53794 Query 22182 TACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCA 22241 || ||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || Sbjct 53795 TAAAGCCACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCG 53854 Query 22242 TTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCG 22301 || | ||||| || || || || ||||||||||| || |||| || || |||| Sbjct 53855 TTTGATGTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGAT 53914 Query 22302 ACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAA 22361 || || || || || ||||||||||| || || || || | | || || | || || Sbjct 53915 ACTGGCTCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAAT 53974 Query 22362 CAAGTTGTAGC-GGCAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAG 22420 || ||||| | || | | | || ||||| | || ||||||||||| | || | Sbjct 53975 ACAGAAGTAGCTGTTAATAATGTA-GGGATCATTAATACACCGAACCATCCGATGTATAA 54033 Query 22421 ACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 |||||| | ||| || |||| ||| |||||||| Sbjct 54034 ACGGTTCTCAGTTGAAGTGATCCATGAACAAAA 54066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146207963539380