Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq21 827 0.0 >seq21 Length=72700 Score = 827 bits (916), Expect = 0.0 Identities = 770/975 (79%), Gaps = 2/975 (0%) Strand=Plus/Plus Query 26734 GCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCA 26793 || || || | ||| || || || ||||| | ||||| || || || | ||||| | Sbjct 53084 GCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAAGGTTA 53143 Query 26794 GCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGAC 26853 |||||||| | || || ||||| ||||||| |||||| || | |||||| | ||| ||| Sbjct 53144 GCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCACTGAC 53203 Query 26854 TGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAAC 26913 || ||||||||||| ||||| || ||||||||||| || || | |||||| || |||||| Sbjct 53204 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTGTGAAC 53263 Query 26914 CAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAAT 26973 ||||| || | || ||||| ||| ||||||||||| | |||||||||||||||||| Sbjct 53264 CAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 53323 Query 26974 GAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTC 27033 ||||| ||||||||||| | ||| |||||||| || || || || || |||||||| ||| Sbjct 53324 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGTAAGTC 53383 Query 27034 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGG 27093 ||||||||||| |||||||| || || ||| ||| || | ||||| || |||||| Sbjct 53384 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTTCACGG 53443 Query 27094 ACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACC 27153 | |||||||| || || || |||||||||||||||||||| || ||||||||||| Sbjct 53444 ATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGAATACA 53503 Query 27154 CCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACA 27213 ||||| || || ||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct 53504 CCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 53563 Query 27214 AGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGA 27273 | |||| |||| ||||| ||||| ||||||||||||||| | || |||||||| || || Sbjct 53564 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATCCCTGT 53623 Query 27274 CCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACA 27333 |||| || || | || |||||||||| | ||||| || || |||||||| || |||||| Sbjct 53624 CCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAGTAAGCTACA 53683 Query 27334 CAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCA 27393 |||||| |||||||| |||||||| |||| || ||||||||||| ||||| || | | Sbjct 53684 GCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCATGTATGAA 53743 Query 27394 TAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCAC 27453 | | ||||| | |||||| | || | || ||| |||| |||||||| || | |||| Sbjct 53744 CATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGTAAAGCCAC 53803 Query 27454 TCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTT 27513 ||||| |||| |||||||||||||||||||||||||| || ||||| || ||||| | Sbjct 53804 TCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTTGATGTA 53863 Query 27514 GGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCA 27573 || || || |||||||| ||||||||||| || ||||||||||| |||| || || ||| Sbjct 53864 GGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 53923 Query 27574 CGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGT 27632 |||||||| || || || || || || |||||||||||||| || ||||| |||| ||| Sbjct 53924 CGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATACAGA-AGT 53982 Query 27633 TGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTGTT 27692 |||| ||| | ||| |||||||| | |||||||||||| || | || |||||||| | Sbjct 53983 AGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCCGATGTATAAACGGTTCTC 54042 Query 27693 AGTTGATGTCACCCA 27707 |||||| || | ||| Sbjct 54043 AGTTGAAGTGATCCA 54057 Score = 531 bits (588), Expect = 7e-146 Identities = 742/1031 (72%), Gaps = 12/1031 (1%) Strand=Plus/Plus Query 23385 AATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCA---ATTACAGGAAAGTTTTCGTGT 23441 ||| ||||||| || || | |||||| | |||||| | |||| | |||||| || Sbjct 61464 AATTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAG---GTTTTCATGA 61520 Query 23442 GGTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTG 23501 || || || || ||||||| |||||| || | ||| | | ||| || |||||| Sbjct 61521 GGCTGATCTTGAGCTGCCATCCATGCACGGATTCCTTCGTTAAGAAGAATGTTCTTCGTG 61580 Query 23502 TAGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAA 23561 ||||| || || || | |||||| |||||||| |||||||| || || || || Sbjct 61581 TAGAATGTTTCGAACTCAGGATCTTCTGCAGCACGGATCTCTTGTGATACGAAGTCGTAT 61640 Query 23562 GCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCA-TGAC 23620 ||||| || ||||| || | || | | |||| | || | ||| | ||||| | || Sbjct 61641 GCACGGAGGTTAAGTGCTAATCCTACTACTCCAAGTGCTGACATCCATA-ACCCAGTAAC 61699 Query 23621 AGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGAT 23680 ||| || || | ||| |||||||| | ||||||||| || || || || ||||| || Sbjct 61700 AGGTACGAAGAGCATGAAGAAGTGAAGCCAACGCTTGTTTGAGAAAGCTACACCGAAAAT 61759 Query 23681 TTGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATC 23740 |||||||| ||||| || || || ||||| || || ||||| || | ||||| | | Sbjct 61760 CTGTGACCAGAAACGGTTAGCCGTTACCATTGAGTAAGTCTCTTCTGCTTGAGTTGGGTT 61819 Query 23741 GAACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAAC 23800 ||| || || ||||||| || |||||||| | ||||| ||||| ||||| | Sbjct 61820 GAATGCACGGAATGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGC 61879 Query 23801 TCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAA 23860 ||| ||||| ||| | ||||||||| | || |||| |||||| ||||||||||| ||||| Sbjct 61880 TCCGTGAATTGCACAAAGAAGTGCTGCACCGAGTACACCAGCTACTCCCATCATGTGGAA 61939 Query 23861 GGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGC 23920 ||||| || |||||||| || || || |||| ||| |||| || | |||||| | || Sbjct 61940 TGGGTTAAGTGTCCAGTTGTGGAAACCTTGGAAGAAAAGAATAAAACGGAAAATTCCAGC 61999 Query 23921 AACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATAC 23980 ||||| || || |||||||||||| ||| || || | || || || |||||||| Sbjct 62000 TACACCAAATGATGGTGCAAAGAACCAACCTGATTGCCCAAGTGGGTAAATAAGGAATAC 62059 Query 23981 AGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAAT 24040 ||| || || |||||||| || | || || |||||||| ||||| ||||| ||| | Sbjct 62060 AGATACAAACACAGCAATTGGTGCTGAGAATGCAATCGCGTTGTATGGACGAATTTGTAC 62119 Query 24041 TAGACGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAG 24100 | ||| || | |||||| ||||| | |||||| || || | | |||| || ||||| || Sbjct 62120 TGCACGAGCAATTTCAAATTGACGAAGCATAAATCCGATTAATCCAAATGCTCCGTGAAG 62179 Query 24101 AGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTC 24160 ||| || || | ||| | || |||||||| ||| ||| ||||| ||||| | || Sbjct 62180 AGCTACGAATGTCCATAATCCACCAAGTTGACACCAACGTGTGAAGTCACCTTGTGCTTC 62239 Query 24161 AGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGC 24220 || |||||||| |||||||| || || |||| |||| | ||||| || || |||| Sbjct 62240 TGGTCCCCAAAGGAGAAGAAGTGAGTGTGCCATCGCGTTTGATGGCGTTGATACTGCTGA 62299 Query 24221 CGTAAGAAAGTTAGCACCC-TCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCG 24279 || || |||||| ||||| ||||| || ||||| || | || || |||||||| | Sbjct 62300 AGTGAGGAAGTTA-CACCCTTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAG 62358 Query 24280 TAACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCA-GTGGGAAGAAGT 24338 | || || | ||| ||||||||||| || |||| |||| || ||| |||||| || | Sbjct 62359 TTACGAATGTTGTTCCAGTAAGCCATCCACCAAGTGCAAAGTATGCACATGGGAATAA-T 62417 Query 24339 AGGAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATG 24398 | |||||||||||||| || || || || || || || |||| |||||| || | | || Sbjct 62418 AAAAGTCCAGACCAACCTACGAATACGAAACGGTCACGCTTAAGCCAGTCATCTACGTTG 62477 Query 24399 TCAAACCATCC 24409 || ||||| || Sbjct 62478 TCGAACCAACC 62488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665494225307720