Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq21 592 2e-164 >seq21 Length=72700 Score = 592 bits (656), Expect = 2e-164 Identities = 700/948 (74%), Gaps = 0/948 (0%) Strand=Plus/Plus Query 7886 CAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTA 7945 ||||||| | ||| | |||||||||||| || || | || ||||| ||||||||||| | Sbjct 53079 CAGATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAA 53138 Query 7946 AGTTTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAA 8005 ||| || | ||||| | ||| ||||||| || | || || ||| || | Sbjct 53139 GGTTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCA 53198 Query 8006 CTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAG 8065 |||| ||||| ||||| |||||||||||||| || ||||| || ||||||| | || | Sbjct 53199 CTGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTG 53258 Query 8066 TTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGT 8125 | ||||| | | | || || | |||||||||||||||| || | ||||| Sbjct 53259 TGAACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 53318 Query 8126 TAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTAT 8185 | || || || || |||||||| | | || ||||| || |||||||| ||||| || | Sbjct 53319 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGT 53378 Query 8186 AGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCT 8245 | |||||||||||||| || ||||| || || ||| || || | ||||| || | Sbjct 53379 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTT 53438 Query 8246 CTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGA 8305 | | ||| || ||||| || || | ||||||||||||||| ||| ||||| ||||||| Sbjct 53439 CACGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGA 53498 Query 8306 ACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGA 8365 | | ||| ||||| || ||| ||||| || |||||||| ||||| ||||| || |||| Sbjct 53499 ATACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 53558 Query 8366 ATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAAC 8425 |||||| ||||||||| || || ||||||||||| |||||||| || |||||||| || | Sbjct 53559 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATC 53618 Query 8426 CCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATG 8485 |||| || | ||| || | | ||| ||||| ||||| | ||| |||||| || | Sbjct 53619 CCTGTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAGTAAG 53678 Query 8486 CTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGT 8545 ||||| |||||| || | ||| ||||| ||| |||| | |||||||| | |||||||| Sbjct 53679 CTACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCATGT 53738 Query 8546 AAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACA 8605 | | | | | ||| || | |||||| | | | | ||| || || || ||||| || | Sbjct 53739 ATGAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGTAAA 53798 Query 8606 ACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGG 8665 ||||||||| | ||| || |||||||| || || |||||||| | ||| |||||||| | Sbjct 53799 GCCACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTTG 53858 Query 8666 AAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAG 8725 | | ||||| |||||||||||||||||||||||||| ||||| | ||| || | || | Sbjct 53859 ATGTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 53918 Query 8726 GTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAG 8785 | ||||||||||| ||||| || || || ||||| || || ||||| ||||| || || Sbjct 53919 GCTCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATACAG 53978 Query 8786 TAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGA 8833 || ||| | ||| || ||| ||||||| || || ||||| |||| Sbjct 53979 AAGTAGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCCGA 54026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615862238336120