Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq21 711 0.0 >seq21 Length=72700 Score = 711 bits (788), Expect = 0.0 Identities = 736/959 (77%), Gaps = 6/959 (1%) Strand=Plus/Minus Query 165796 AACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCAGCAACT 165855 |||||| | || |||| ||||| ||| | ||||| || || | || |||| ||| Sbjct 54039 AACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCTACATTATTAACAGCTACT 53980 Query 165856 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 165914 |||| |||||||| || |||||||| ||||| || ||||||||||| || || ||||| Sbjct 53979 -TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGACATCGATGGTATTCGTGA 53921 Query 165915 ACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 165974 || || |||| || || ||||| || |||||||||||||||||||| || ||||| | Sbjct 53920 GCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCTAC 53861 Query 165975 TTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAATG 166034 || ||||| || || || |||||||| || ||||||||||| || | ||||| || || Sbjct 53860 ATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTACACTTGATGAGTG 53801 Query 166035 GCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATCTATGC 166094 ||| || |||||||| |||| ||| || | || | |||||| | || || | | | | Sbjct 53800 GCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAGTATGTTC 53741 Query 166095 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 166154 |||||||||||||||||||| || || | |||| |||| |||||||| |||||| ||| Sbjct 53740 ATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAATGCGTCCTTGGATCGCTGT 53681 Query 166155 TGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCA 166214 |||||||| || || || || ||||| | |||||||||| | | || || |||| || Sbjct 53680 AGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCATCATTTACCCAATCGGACA 53621 Query 166215 AGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274 || ||||||||| | ||||| || || || || ||||| ||||||| |||| | || Sbjct 53620 GGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGT 53561 Query 166275 CTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGT 166334 ||||| ||||||||||| || || ||||| || ||||| ||||| || || ||||| || Sbjct 53560 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGAGTAGCTGGTGT 53501 Query 166335 ATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTT 166392 ||| ||||| || ||| | |||||||||||| | || |||||||| || | Sbjct 53500 ATTCGGTGGTTCACTTTTCTC--TGCTATGCACGGTTCACTCGTAACTTCTTCACTTATC 53443 Query 166393 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 166452 | || || ||||| | |||||| ||| || ||||||||||||||||||||||| Sbjct 53442 CGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTTCGGACAAGAAGAAGAG 53383 Query 166453 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 166512 || |||||||| ||||| ||||| ||||||||||| ||| | |||||||||||||||||| Sbjct 53382 ACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCA 53323 Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572 ||||||||||| || || | ||||||||||| ||| |||||||| | || |||||| Sbjct 53322 TTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCCTGTAATGGGAATCTGG 53263 Query 166573 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 166632 ||||| || ||||| | || || ||||| |||||||| ||||| ||||||||||||||| Sbjct 53262 TTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAG 53203 Query 166633 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCT 166692 || | | ||| | || |||||| | ||||| ||||| ||| || | ||||| ||| Sbjct 53202 TCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGATATTGTAAACCGTGCT 53143 Query 166693 GGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGC 166751 || ||||||||||| ||||| ||||||||||| ||||||||||| || |||||||| Sbjct 53142 AACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTCGC 53084 Score = 553 bits (612), Expect = 2e-152 Identities = 743/1027 (72%), Gaps = 8/1027 (1%) Strand=Plus/Minus Query 167008 GGGTGGTTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGG 167067 || ||||| || | | |||||||||||||| | || ||||| || || || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 167068 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 167126 ||||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 167127 TACTTTCGTCACGAGTTGGTATACTCATGGACTCGC--GTCCAGTTATCTTGA-GGGTGC 167183 || ||||| || ||||| || || || | || || || || ||||| ||||| Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCA--TACCTTGAAGGGTGT 62312 Query 167184 GAACTTTCTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCT 167243 ||||| || ||| | ||||| || ||| || | | |||| || || | ||||| Sbjct 62311 -AACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCT 62253 Query 167244 TCTATGGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTG 167303 || ||||| || ||| | ||||| || ||| | ||| |||||||| ||| | || Sbjct 62252 CCTTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATG 62193 Query 167304 GGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGA 167363 | | || || || || |||||||| |||| | || || || |||||||| || ||||| Sbjct 62192 GACATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGA 62133 Query 167364 ACTTGCTCGCCTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGC 167423 | ||||||| | || ||||| ||||| || ||||| ||||| | || ||||| Sbjct 62132 AATTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGC 62073 Query 167424 TGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCC 167483 ||| || || || |||||| | || || || || ||| | ||||||||||| || Sbjct 62072 TGTGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACC 62013 Query 167484 GTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTG 167543 || || || || || | || ||||| || | || ||| ||||||| ||||||||||| Sbjct 62012 ATCATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTG 61953 Query 167544 GACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTC 167603 |||||| || ||||| || |||||||| ||||| ||| | || |||| ||| | |||| Sbjct 61952 GACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTG 61893 Query 167604 TGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACAC 167663 |||||| || || | || |||||||| || | | ||||||||||| ||||||| Sbjct 61892 TGCAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACAC 61833 Query 167664 TTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCG 167723 || |||||| | | ||||| | |||||||||||| |||||||| || || ||||| Sbjct 61832 ATTCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCG 61773 Query 167724 ATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTAT 167783 |||||||| ||||| ||||| | |||||| ||||| || |||||||| ||||| || Sbjct 61772 TTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCAT 61713 Query 167784 GTTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCT 167843 | | ||||| || |||| || | |||| ||| | |||| | | || | || || Sbjct 61712 GCTCTTCGTACCTGTTACTGGGTTATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACT 61653 Query 167844 TAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTT 167903 ||| || ||||| ||||| ||||| || ||||||||| | || || || ||||| ||||| Sbjct 61652 TAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTT 61593 Query 167904 TGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACC 167963 ||||| ||||| || || ||||| ||||| || ||||| | || |||||| | ||| | Sbjct 61592 CGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGC 61533 Query 167964 TATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGC 168023 | ||||| |||||||| ||| |||| ||||| ||||| || || ||||| || ||||| Sbjct 61532 TCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 61473 Query 168024 ACTATAA 168030 || ||| Sbjct 61472 TCTTTAA 61466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561247852672400