Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq21 661 0.0 >seq21 Length=72700 Score = 661 bits (732), Expect = 0.0 Identities = 744/993 (75%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293 |||||||| ||| |||| || ||| | |||||| | || | ||||||||||| || | Sbjct 54066 TTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTA 54007 Query 41294 ATGATTCCGTGCCTCCTTGCC-GCTACAACTTGTTTTATTATCGCCTTTGTTGGCGCACC 41352 ||||| || | | | || | ||||| || || || | || || | | || || Sbjct 54006 ATGATCCC-TACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATCGCAGCTCC 53948 Query 41353 ACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAA 41412 || || ||||||||||| || || || || || |||| || || |||| || ||||| Sbjct 53947 TCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAA 53888 Query 41413 CATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAAT 41472 |||||| || || || || ||||| | || || |||||||| |||||||||||||| Sbjct 53887 CATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAAT 53828 Query 41473 TTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGT 41532 |||||||| |||||||||||||| ||||| |||||||| || || | ||| || | ||| Sbjct 53827 CTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGT 53768 Query 41533 ATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCG 41592 || |||||| |||| || || | | | |||||||| || |||||||| ||| | || Sbjct 53767 ATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCG 53708 Query 41593 ACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGC 41652 |||| ||| | || |||||| ||| || |||||||||||||| || ||||| ||||| Sbjct 53707 TTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGC 53648 Query 41653 TGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGAT 41712 || ||| | |||| || | |||||||| ||||| ||||| | |||||| | || || Sbjct 53647 AGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTAT 53588 Query 41713 ATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCC 41772 || || || ||||||| |||| | || ||||||||||||||||| || |||||||| || Sbjct 53587 TTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 53528 Query 41773 TTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGG 41832 || |||||||| || || || || ||||| ||||| | ||||||||||||||||| Sbjct 53527 ATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGG 53468 Query 41833 TAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGG 41892 | || || || || ||||| || ||||| || ||||| | | ||| ||| || Sbjct 53467 TTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGG 53408 Query 41893 TTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGG 41952 |||||||| || ||||| |||||||||||||| ||||| ||||||||||| || || || Sbjct 53407 ATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGG 53348 Query 41953 TCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGC 42012 || |||||||||||||| ||| || || || || ||| || || ||||| || || Sbjct 53347 ACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGC 53288 Query 42013 TGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAA 42072 | ||||||||| | || || ||||| | || ||||| | ||||| ||||||||||| Sbjct 53287 TATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAA 53228 Query 42073 CTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACAC 42132 | | || || |||||||| ||||| || || ||| | | | |||| ||||||||||| Sbjct 53227 CCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACAC 53168 Query 42133 CTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGC 42192 |||||||| ||| | |||||||| |||||||| | || || ||||| ||||| ||||| Sbjct 53167 ATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGC 53108 Query 42193 ACACAACTTCCCGCTTGACCTTGCATCCGTGGA 42225 ||||||||||| |||||||| ||||| || || Sbjct 53107 TCACAACTTCCCACTTGACCTCGCATCTGTAGA 53075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146214363537784