Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq21 535 1e-147 >seq21 Length=72700 Score = 535 bits (592), Expect = 1e-147 Identities = 702/967 (73%), Gaps = 4/967 (0%) Strand=Plus/Plus Query 25874 GATGCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGG 25933 ||||| | ||||||||| ||||| ||||| |||||||||||||| ||||| | || ||| Sbjct 53081 GATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAAGG 53140 Query 25934 TTAGCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACT 25993 ||||| ||||||| | |||||||||||| || | ||| || |||||| ||| Sbjct 53141 TTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCACT 53200 Query 25994 GACTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTC 26053 |||||||| ||||| || || || ||||| || ||||| || | ||||| | || ||| Sbjct 53201 GACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTGTG 53260 Query 26054 AGCCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTA 26113 | ||| || || | || ||||| |||| || ||||| || || ||||| ||| || Sbjct 53261 AACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTG 53320 Query 26114 AAACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATAT 26173 || || || || || || | | || ||||| ||||| ||||| ||||| || || Sbjct 53321 AATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGTAA 53380 Query 26174 GTCTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCT 26233 |||||||| ||||| || ||||| || || || ||| | | ||| || ||||| Sbjct 53381 GTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTTCA 53440 Query 26234 GCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAA 26293 |||||||| ||||| || | ||||||||||||| |||||| | |||||||| Sbjct 53441 CGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGAAT 53500 Query 26294 ACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAAT 26353 || ||||| || ||| ||| |||||||||||||| || || || || || || |||||| Sbjct 53501 ACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAAT 53560 Query 26354 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCT 26413 |||| ||| ||||| ||||| ||||| |||||||||||||| || ||| ||| || Sbjct 53561 ACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATCCC 53620 Query 26414 TGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCA 26473 ||||||| || |||| | ||| ||||| || || | || || || | || || Sbjct 53621 TGTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAGTAAGCT 53680 Query 26474 ACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATAT 26533 ||| ||||| || | |||||||| | | | || || ||||||| | || ||| Sbjct 53681 ACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCATGTAT 53740 Query 26534 GCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGC 26593 | |||||| || |||||||| | | || || || || ||||| || ||||| ||| Sbjct 53741 GAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGTAAAGC 53800 Query 26594 CACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAG 26653 ||||| || ||||| | ||||||||||| ||||| || || |||||||| ||||| || Sbjct 53801 CACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTTGAT 53860 Query 26654 GAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGC 26713 | || || || || || || || || |||||||||||||| | || || || |||||| Sbjct 53861 GTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGC 53920 Query 26714 TCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTAT-AAAACATGT 26772 ||||| || ||||| || || || || || ||||||||||| || | || || ||| | Sbjct 53921 TCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATACA-GA 53979 Query 26773 AGTGGCTGCGAGTAA-GCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGT 26831 ||| |||| | ||| | |||| ||||| | || ||||||||||| | || | ||||| Sbjct 53980 AGTAGCTGTTAATAATGTAGGG-ATCATTAATACACCGAACCATCCGATGTATAAACGGT 54038 Query 26832 TCTCAGT 26838 ||||||| Sbjct 54039 TCTCAGT 54045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147711963164320