Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq21 625 9e-175 >seq21 Length=72700 Score = 625 bits (692), Expect = 9e-175 Identities = 737/992 (74%), Gaps = 8/992 (1%) Strand=Plus/Plus Query 40528 CAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTA 40587 |||| || | ||| || || |||||||||||||||||||||||||||||||||||||| | Sbjct 53079 CAGATGCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAA 53138 Query 40588 GACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTA 40647 | | | ||| | || ||||||||| || || || || || | ||||| | Sbjct 53139 GGTTAGCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCA 53198 Query 40648 CTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGG 40707 |||||||||| ||||| || || || ||||| |||||||||||||| ||||| | | | Sbjct 53199 CTGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTG 53258 Query 40708 TAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGT 40767 | | ||| || || || || || | | | || |||||||| || | ||| |||| Sbjct 53259 TGAACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 53318 Query 40768 TGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTAT 40827 |||||||||| ||||| || || || | || ||||||||||| |||||||| ||||| | Sbjct 53319 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGT 53378 Query 40828 AAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCT 40887 ||||||| |||| || || ||||| || || ||| |||||| | || || || | Sbjct 53379 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTT 53438 Query 40888 CCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAA 40947 | || || | ||| ||||| || || ||||||||||||| || | | |||||| | Sbjct 53439 CACGGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGA 53498 Query 40948 AGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGA 41007 | || || || || || ||||| |||||||||||||| || |||||||| || || |||| Sbjct 53499 ATACACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 53558 Query 41008 AGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAAC 41067 | || | |||||||||||| |||||| || || | ||||||||| ||||||||||| | Sbjct 53559 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATC 53618 Query 41068 CCTGACCGAATGGATAAACTAAGAATA---CAGCTAGAGCTGCTGACAATGGAGCTGTGT 41124 |||| |||| ||| |||| | ||||| ||| | ||||||| ||| ||||| | || Sbjct 53619 CCTGTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCT-ACA--GGAGCAGAGT 53675 Query 41125 ATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAG 41184 | || ||| ||||| || | ||| |||| | | ||||||| ||||||| | ||| Sbjct 53676 AAGCTACAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCA 53735 Query 41185 CGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGT 41244 ||||| |||||| || || |||||| | || || || || || ||||| ||||||| Sbjct 53736 TGTATGAACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGT 53795 Query 41245 ATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGT 41304 | |||||||| || ||||| | |||||||||||||||||||| || |||||||| |||| Sbjct 53796 AAAGCCACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGT 53855 Query 41305 TAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAA 41364 | || | ||||| ||||| ||||| || || ||||| |||||||| | || || || | Sbjct 53856 TTGATGTAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATA 53915 Query 41365 CGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-A 41423 | |||||||| || ||||| || || || || || |||||||| || || | ||||| | Sbjct 53916 CTGGCTCACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATA 53975 Query 41424 CATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGG 41483 || | ||||| |||| ||||| || ||||||| ||||| ||||| || | ||||| Sbjct 53976 CA-GAAGTAGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCCGATGTATAAA 54034 Query 41484 CGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||| || || ||||| ||| |||||| Sbjct 54035 CGGTTCTCAGTTGAAGTGATCCATGAACAAAA 54066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143702364164214