Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq21 771 0.0 >seq21 Length=72700 Score = 771 bits (854), Expect = 0.0 Identities = 758/976 (78%), Gaps = 2/976 (0%) Strand=Plus/Plus Query 67843 GCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCA 67902 || ||||| || ||||||||||| ||||||||||| ||||| ||||||||||| | | Sbjct 53084 GCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAAGGTTA 53143 Query 67903 GCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGAC 67962 || ||||| | || || ||||| || | || || ||| | | ||| Sbjct 53144 GCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGAATCTACCACTGAC 53203 Query 67963 TGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAAC 68022 |||||||||||||| || || |||||||| ||||| || || |||||| || |||||| Sbjct 53204 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTGTGAAC 53263 Query 68023 CAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAAC 68082 ||||| || | |||||||| ||| ||||||||||| || ||||| ||||||||||| Sbjct 53264 CAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 53323 Query 68083 GATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTC 68142 || || || |||||||| ||||| |||||||| || || ||||| ||||||||||||||| Sbjct 53324 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGTAAGTC 53383 Query 68143 TCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGA 68202 ||||||||||| ||||||||||| || ||| || || | ||||| |||||||| Sbjct 53384 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTTCACGG 53443 Query 68203 ACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACG 68262 | ||||||||||| || || ||||| ||||| ||| ||| || || ||||| ||||| Sbjct 53444 ATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGAATACA 53503 Query 68263 CCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACC 68322 ||||| || || ||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct 53504 CCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 53563 Query 68323 AGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGA 68382 | |||| |||||||||| |||||||| || |||||||| |||||||||| || || || Sbjct 53564 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATCCCTGT 53623 Query 68383 CCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACA 68442 |||| || || | | ||| ||||| | ||| ||||| ||||| |||||||| || ||| Sbjct 53624 CCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAGTAAGCTACA 53683 Query 68443 CAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCA 68502 ||||||||||||||| || | ||| | ||||| ||||| ||||| |||||||||| | Sbjct 53684 GCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCATGTATGAA 53743 Query 68503 AAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCAC 68562 | | || || | ||||||| | | | || ||| |||| ||||| ||||| | |||| Sbjct 53744 CATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGTAAAGCCAC 53803 Query 68563 TCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTA 68622 |||||||| || ||||||||||| || || || |||||||| || || || ||||| || Sbjct 53804 TCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTTGATGTA 53863 Query 68623 GGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCA 68682 ||||| ||||||||||| ||||||||||| || |||| |||||| |||| || || ||| Sbjct 53864 GGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 53923 Query 68683 CGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATGGT 68741 |||||||||||||||||||| || ||||| |||||||| || |||||||| ||||| || Sbjct 53924 CGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATACAGA-AGT 53982 Query 68742 TGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTTCTC 68801 |||| | | ||||||||||| | || |||||||| || | ||| | |||||||| Sbjct 53983 AGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCCGATGTATAAACGGTTCTC 54042 Query 68802 TGTGGAAGTCACCCAT 68817 || ||||| | |||| Sbjct 54043 AGTTGAAGTGATCCAT 54058 Score = 569 bits (630), Expect = 2e-157 Identities = 750/1032 (73%), Gaps = 6/1032 (1%) Strand=Plus/Plus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || || || || || |||||||||| ||||||||| || | Sbjct 61465 ATTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGAGGCT 61524 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||||||||| | ||||| || | ||||||||||| ||||||| Sbjct 61525 GATCTTGAGCTGCCATCCATGCACGGATTCCTTCGTTAAGAAGAATGTTCTTCGTGTAGA 61584 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | || |||||||| || |||||||| || | ||||||||| ||||| ||||| || |||| Sbjct 61585 ATGTTTCGAACTCAGGATCTTCTGCAGCACGGATCTCTTGTGATACGAAGTCGTATGCAC 61644 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCA-TAACAGGA 66824 | ||||| || || | || | | || | | |||| | ||||| ||||||| Sbjct 61645 GGAGGTTAAGTGCTAATCCTACTACTCCAAGTGCTGACATCCATA-ACCCAGTAACAGGT 61703 Query 66825 ACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGA 66884 || || | ||| ||||| || | ||| | ||| || || || | ||| || ||||| Sbjct 61704 ACGAAGAGCATGAAGAAGTGAAGCCAACGCTTGTTTGAGAAAGCTACACCGAAAATCTGT 61763 Query 66885 GACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAAT 66944 |||||||| ||||| || || |||||||||||||| ||||| ||||||| | || |||| Sbjct 61764 GACCAGAAACGGTTAGCCGTTACCATTGAGTAAGTCTCTTCTGCTTGAGTTGGGTTGAAT 61823 Query 66945 GCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCA 67004 || ||| ||||||| ||||||||||| | || || |||||||| || | || Sbjct 61824 GCACGGAATGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGCTCCG 61883 Query 67005 TGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGG 67064 ||||| ||| |||| | ||| |||| || | ||| ||||| |||||||| || || ||| Sbjct 61884 TGAATTGCACAAAGAAGTGCTGCACCGAGTACACCAGCTACTCCCATCATGTGGAATGGG 61943 Query 67065 TTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACC 67124 || | |||||||| ||||| ||||| | ||| |||| || || || ||| | | || Sbjct 61944 TTAAGTGTCCAGTTGTGGAAACCTTGGAAGAAAAGAATAAAACGGAAAATTCCAGCTACA 62003 Query 67125 CCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTA 67184 || || ||||| || || ||||||| ||||| || || ||||| || || || ||| Sbjct 62004 CCAAATGATGGTGCAAAGAACCAACCTGATTGCCCAAGTGGGTAAATAAGGAATACAGAT 62063 Query 67185 ACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA 67244 ||||| ||||| || || | ||||| ||||| || ||||| ||||| || | | Sbjct 62064 ACAAACACAGCAATTGGTGCTGAGAATGCAATCGCGTTGTATGGACGAATTTGTACTGCA 62123 Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304 || || | |||||| || |||||||| || || |||| | || || ||||| || || Sbjct 62124 CGAGCAATTTCAAATTGACGAAGCATAAATCCGATTAATCCAAATGCTCCGTGAAGAGCT 62183 Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364 || || |||| | ||| |||||||| ||| || ||| || || || | || || Sbjct 62184 ACGAATGTCCATAATCCACCAAGTTGACACCAACGTGTGAAGTCACCTTGTGCTTCTGGT 62243 Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTG 67424 |||||||| |||||||| || || |||| || | | |||||||| || || | ||| Sbjct 62244 CCCCAAAGGAGAAGAAGTGAGTGTGCCATCGCGTTTGATGGCGTTGATACTGCTGAAGTG 62303 Query 67425 AGAAAATTAGCACCC-TCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGAC 67483 || || ||| ||||| ||||| || | || | ||||| |||||||| || || Sbjct 62304 AGGAAGTTA-CACCCTTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAGTTAC 62362 Query 67484 AAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCA-GTGGGAAAAAGAAGTA 67542 || || || ||||||||||| ||||||| ||| | || ||| |||||| || || | Sbjct 62363 GAATGTTGTTCCAGTAAGCCATCCACCAAGTGCAAAGTATGCACATGGGAATAATAA-AA 62421 Query 67543 GTCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATCAAGGACATCGA 67602 ||||||||||||| || || || || || || || |||||||||||||| | | |||| Sbjct 62422 GTCCAGACCAACCTACGAATACGAAACGGTCACGCTTAAGCCAGTCATCTACGTTGTCGA 62481 Query 67603 ACCACCCCCGTT 67614 |||| || |||| Sbjct 62482 ACCAACCACGTT 62493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572054249835720