Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 136 1e-26 seq1 113 1e-19 >seq3 Length=741603 Score = 136 bits (150), Expect = 1e-26 Identities = 219/312 (70%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 ||||||||| ||||| ||||| | |||||| ||||| ||| || ||||| || || Sbjct 233752 GTCTTCCATCGCCTTGACCAAACGTCTCTGAATGTAACCGGTTTCGGAGGTTTTCACCGC 233811 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 ||||| || ||||| | || |||||||| || |||||||| | |||| || | Sbjct 233812 GGTATCGATGAGACCTTCGCGGCCACCCATGGCGTGGAAGAAGAATTCTTGAGGGGTCAA 233871 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CGAA-TCGTCGAACTT 302747 ||| | | | ||| | || |||||||| || | |||||| |||| || || ||| Sbjct 233872 CCCTCTTAAGTACGAGTTTTCGACGAAACCTCGAGACTCGGGACCGAAATCATC---CTT 233928 Query 302748 GGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTT 302807 || ||| || || | | |||| | | | ||||| |||||||| ||||| || ||||| Sbjct 233929 GGAAAAATGCGGTAAACTTCTGTCCACGAAACCGTACGGGATACGTTTTCCTTCGACGTT 233988 Query 302808 CTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGC 302867 ||||| || | ||||| |||||||||||| ||||| | ||||| || || || Sbjct 233989 TTGCTGACCGACGCACGCGCACATCTGCGAAATGTTTAAGAAAGAACCCTTAGAACCGGC 234048 Query 302868 ATTTACCATAAT 302879 | ||||| || Sbjct 234049 TTGCACCATCAT 234060 >seq1 Length=1352724 Score = 113 bits (124), Expect = 1e-19 Identities = 594/945 (63%), Gaps = 5/945 (1%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || |||| ||||| || ||||| || | | || | || |||| || ||||| Sbjct 25542 ATGGAGGCCAAGTTACAAACGGCAGTTTCTTCCGGCGAGG-TGAATTCGACGATCTCTGT 25600 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||||| ||| || ||||| ||||| ||||| | ||||| || || | ||| || || Sbjct 25601 GCACAAGTTGGACGATTTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCACGC 25660 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCA 155767 ||||||| | | ||||| ||| | || || |||| || || || |||||| | ||| Sbjct 25661 ATCCTTGAACAACATGTACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAACCA 25720 Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAG 155827 || | |||| || || ||| || || ||| || || || | |||| Sbjct 25721 AAGCTGCTGGGCGTTGATCGTCTTCTTACCCTTGTTTTCTTTTTCGTACTTGGTGTACAA 25780 Query 155828 CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAG 155887 | | | || ||||| | || || || || ||||||| | ||||| | | Sbjct 25781 AGCTTCAAACTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGTTCGGGCACATTAA 25840 Query 155888 CGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATA 155947 || ||| | || | || | | ||| || | ||| ||| ||| | | | || Sbjct 25841 CGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAACCGTA 25900 Query 155948 GAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTC 156007 || | ||| | || | | || || | ||||| ||||| || | || | | || Sbjct 25901 AAACAAGTCACGAGCTCTCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTC 25960 Query 156008 CTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT---GCC 156064 || |||| || || || || || || |||||| || || | ||| ||| Sbjct 25961 GAAGATGTCAGAGTGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCC 26020 Query 156065 ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATT 156124 || || || || |||| || || | ||||| || | ||||| ||||| ||||| || Sbjct 26021 GCCTTGGTCCACGTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTT 26080 Query 156125 GGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAG 156184 || || || || || || | ||| | ||| || | ||| | | |||||| | Sbjct 26081 CGAGGTACCGTTTGTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAA 26140 Query 156185 TCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACC 156244 |||||||| || | | || ||||| ||||||||||| | || | | | ||||| Sbjct 26141 ACCAATACCGCCGGCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACC 26200 Query 156245 TTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGT 156304 |||||| || || || | ||| | | | | ||||||| | ||| ||||| || || Sbjct 26201 TTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGT 26260 Query 156305 TCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTA 156364 || |||||||| | || || | || || | | | | ||||| | || Sbjct 26261 ACCGGCGTTGAACAAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAACATGTGATA 26320 Query 156365 TGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACAT 156424 || || | ||| || | || | ||| |||| ||| || || |||||| |||| Sbjct 26321 CGTATCAACAGCCTTTTCGATATCCTTCTTGTGGATACCGATGGATACTCTCATCAACAT 26380 Query 156425 ATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGT 156484 ||||| || ||||| |||| || || || |||| | ||| | ||| |||| ||| Sbjct 26381 GTGCTGCGGGCGCTCGACAACTTTACCGTCGATGCGCAACAAGTACGAGCGCTCCAAAGT 26440 Query 156485 TTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 ||| || || || || || | ||| ||||||| ||| |||| Sbjct 26441 TTTGAAACCAAAGTAGTCGTAATCAAAGTCACGGTCGTAGACAAT 26485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817203989077