Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq21 836 0.0 >seq21 Length=72700 Score = 836 bits (926), Expect = 0.0 Identities = 772/975 (79%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 157589 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 157648 ||| | ||||| || | ||||| | || |||| |||||||| ||| | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 157649 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 157707 || | || |||| || ||||| |||||||| || ||| |||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 157708 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 157767 |||||| || || ||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 157768 TGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 157827 |||||| || || || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 157828 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTT 157887 || |||||||||||||||| || |||||||| |||| ||| || | |||| |||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 157888 CCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTAT 157947 | |||| || | | | |||||||||| ||||||||||| ||||||| ||||||||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 157948 GCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 158007 ||| || |||||| |||||| || |||||||| || || || ||| |||| |||||| | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 158008 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 158067 | | || || |||| || || |||||||| || | ||||||||||||||| ||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 158068 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 158127 ||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| || Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 158128 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGT 158187 ||| || || ||||| ||||||||||| || |||||||||||||||||||| ||||| Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 158188 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTT 158247 ||||| ||||| | |||||||| ||||| | || ||| ||| || |||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 158248 CGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 158307 ||| ||||| |||||||| || ||||| || || || || || |||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 158308 CTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCC 158367 ||||||||||||||||||||||||||| ||||| | ||||||||||| ||| ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 158368 TGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGG 158427 ||| | || ||||||||||| || ||||| | || || ||||| |||||||| ||||| Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 158428 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 158487 ||||||||||||||||| | | ||| | || |||||| | ||||| ||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 158488 TGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158547 | | | ||||| ||| |||||||||||||| ||||| ||||||||||| |||||||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 53099 Query 158548 CCCACTCGACCTTGC 158562 |||||| ||||| || Sbjct 53098 CCCACTTGACCTCGC 53084 Score = 618 bits (684), Expect = 5e-172 Identities = 758/1027 (74%), Gaps = 6/1027 (1%) Strand=Plus/Minus Query 159288 GGGTGGTTCGACATCCTCGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGG 159347 || |||||||||| | | |||||||||||||| || || || || || || || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 159348 TCTGGACTACTACTTCTTCCCAC-TGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCAC 159406 |||||||| || || |||||| ||| || | || |||| || ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 159407 AGCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGA-GGGTGCTA 159465 | | || || || |||||||| |||||| | || ||||| || ||||| ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TA 62311 Query 159466 ACTTTCTCACAGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTAC 159525 |||| ||||| |||| || || ||||| | |||| |||| || || |||||||| | Sbjct 62310 ACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 159526 TTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGA 159585 ||||||| || || | || || | ||| || ||||| |||||||| |||||||||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 159586 ATTTTGTGGCACTCCACGGTGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAAC 159645 || || || || ||||| || || | |||| || || ||||| ||||| |||||| Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 159646 TGGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTG 159705 | || ||| | || ||||| ||||| || ||||| ||||| | || ||||||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 159706 TTTTTGTCAGCGTCTTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGT 159765 | ||||| || ||||| || |||||| | || || || ||||||| || || || | Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 159766 CCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGA 159825 | ||||| || || | ||| || | || | | ||| | ||||| || |||||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 159826 CGTTAAATCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTG 159885 | | || || ||||| ||||||||||| |||||| |||| |||| |||||| || ||| Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 159886 CCATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCT 159945 | || || || | ||||||||||||||||| | |||||||| || |||| || | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 159946 TTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCT 160005 | || || | ||||||||| || ||||||||||| ||||| || || ||||| | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 160006 TCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGT 160065 ||||||| ||||| |||||| | || || || |||||||| |||||||| ||||||||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 160066 TGTTTGTGCCTGTTA-TGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTT 160124 | || || ||||||| ||||| | |||| || | |||| | | || | || ||| Sbjct 61710 TCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 160125 AATCTTCGTGCTTACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTT 160184 || || ||||| ||||| |||||| ||||||||| | || ||||||||||| || || Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 160185 GAGACCTTCTACACCAAAAACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCT 160244 || || |||||||| || ||||| || | ||||||||| | ||||||||| ||||| || Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCT 61532 Query 160245 GCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCC 160304 ||||| || ||||||||| || | ||||| || || ||| | || | || ||||| Sbjct 61531 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 61472 Query 160305 CTTTAAT 160311 ||||||| Sbjct 61471 CTTTAAT 61465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548374256051720