Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq21 800 0.0 >seq21 Length=72700 Score = 800 bits (886), Expect = 0.0 Identities = 767/983 (78%), Gaps = 0/983 (0%) Strand=Plus/Minus Query 150839 TTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCTG 150898 |||||| ||| | || || ||| | |||||| | || |||| ||||||||||| | Sbjct 54066 TTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTA 54007 Query 150899 ATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATCGCTGCTCCC 150958 ||||| || || | || |||| || | |||||||| ||||||||||| ||||| Sbjct 54006 ATGATCCCTACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATCGCAGCTCCT 53947 Query 150959 CCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACAAC 151018 || |||||||||||||| || ||||| || || |||| || || |||||||| |||||| Sbjct 53946 CCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 53887 Query 151019 ATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCATC 151078 ||||||||||||||||| |||||| | || ||||||||||| || |||||||| || ||| Sbjct 53886 ATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATC 53827 Query 151079 TGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTC 151138 ||||||||||| | || ||||| ||||| ||||||||||| |||| ||| || | || Sbjct 53826 TGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTA 53767 Query 151139 TTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCGC 151198 | |||||| | || || | | | | |||||||||||||||||||| || || | ||| Sbjct 53766 TGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGT 53707 Query 151199 TTGGGTATGCGTCCCTGGATCTGCGTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCA 151258 || || |||||||| |||||| || || ||||||||||| || || ||||| | |||| Sbjct 53706 TTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCA 53647 Query 151259 GTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTATT 151318 || ||| || | || || |||| || || ||||||||||| | ||||| || |||||| Sbjct 53646 GTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATT 53587 Query 151319 TCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACCCC 151378 ||||| || ||||||| |||| | || ||||| || ||||||||||| || |||||||| Sbjct 53586 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 53527 Query 151379 TTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGGT 151438 ||||| |||||||| || |||||||| |||||||| || || ||||| || ||||||||| Sbjct 53526 TTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGT 53467 Query 151439 TCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATGGT 151498 || || || |||||||| || | ||||| || || || ||||| || ||| || Sbjct 53466 TCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGA 53407 Query 151499 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTGGT 151558 ||||||||||| |||||||||||||| |||||||| || || || ||||||||||| || Sbjct 53406 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGA 53347 Query 151559 CGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCA 151618 ||||| ||||||||||||||||| |||||||| || ||||| || |||||||||||||| Sbjct 53346 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCT 53287 Query 151619 GCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAAC 151678 |||||||| | || ||||||||||| || |||||| | || ||||| |||||| Sbjct 53286 ATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAAC 53227 Query 151679 CTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACC 151738 || ||||| ||||||||||||||||| | | ||| | || || | ||||| Sbjct 53226 CTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACA 53167 Query 151739 TGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCT 151798 ||||| || || | |||||||| || ||||||||||| |||||||||||||| ||| Sbjct 53166 TGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCT 53107 Query 151799 CACAACTTCCCTCTCGACCTTGC 151821 ||||||||||| || ||||| || Sbjct 53106 CACAACTTCCCACTTGACCTCGC 53084 Score = 578 bits (640), Expect = 4e-160 Identities = 744/1021 (73%), Gaps = 4/1021 (0%) Strand=Plus/Minus Query 152353 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGG 152412 || ||||| || | | ||||||||||||||| | ||||||||||| || || |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 152413 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 152471 ||||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 152472 TACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAA 152531 || |||| || ||||| || ||||| || |||||||| || || || || || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 152532 CTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCT 152591 ||| || ||| | ||||| || || ||| || | || |||| || || ||||| || || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 152592 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGC 152651 ||||| || || || ||||| || ||| | ||| ||| || || ||| | ||| | Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 152652 TTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACT 152711 || || || || ||||| || || | ||||||| || |||||||| || |||||| | Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 152712 GGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGT 152771 || ||| | || ||||| ||||| || ||||| ||||| | || || ||||| Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 152772 TTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATC 152831 ||||| || || || || ||||| || || ||||| ||||||| || || ||||| Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 152832 TTTCGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGAC 152891 || || || || | ||| ||||| || |||| ||| | ||||| |||||||||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 152892 ATTGAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGC 152951 | | || || || || |||||||| || || ||| | | || | || | |||| ||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 152952 CATTCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTT 153011 ||||| || | || |||||||| || | | |||||||||| ||||||| || Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATT 61830 Query 153012 CAAAGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTT 153071 | || ||| || ||||||| ||||||||| || || ||||| || ||||||||||| Sbjct 61829 CCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTT 61770 Query 153072 CTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCT 153131 |||||| ||||| || || | ||||| || || || |||||||| ||||| ||||| Sbjct 61769 CTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCT 61710 Query 153132 GTTTGTACCTGTTA-TGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCA 153190 || |||||||||| ||||| | |||| || | ||||| | | || | || || | Sbjct 61709 CTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTA 61651 Query 153191 ATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTG 153250 | || ||||| ||||| || ||||| ||||| ||| | || ||||||||||||| || | Sbjct 61650 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCG 61591 Query 153251 AGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTG 153310 | || ||||| |||||||| || ||| | |||||||| | ||||| ||| ||||| || Sbjct 61590 AAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTC 61531 Query 153311 TTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTC 153370 || || |||||||| ||| | || |||||||| |||||| | ||||| || ||||||| Sbjct 61530 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 61471 Query 153371 T 153371 | Sbjct 61470 T 61470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549622255724120