Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq21 722 0.0 >seq21 Length=72700 Score = 722 bits (800), Expect = 0.0 Identities = 763/999 (76%), Gaps = 7/999 (1%) Strand=Plus/Minus Query 72227 GGGACGAGTTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTG 72286 |||||| |||||| ||| | || || ||||| || || | ||| | || ||||| | Sbjct 54073 GGGACGT-TTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCG 54015 Query 72287 GTGTCTTAATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCG 72346 |||| ||||||||||| | |||| ||| || || ||||| ||||||||||||| Sbjct 54014 GTGTATTAATGATCCCTACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATCG 53955 Query 72347 CTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATG 72406 | ||||||||||| || ||||| || || | || ||||| | || || | | || | Sbjct 53954 CAGCTCCTCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACG 53895 Query 72407 GTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCT 72466 | ||||||||||||||||||||||||||||| | |||||||| || ||| | ||||||| Sbjct 53894 GAAACAACATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCT 53835 Query 72467 ATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGT 72526 | || |||||||||||||| || | || |||||| | || ||||| || ||||||||| Sbjct 53834 ACCCAATCTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGC 53775 Query 72527 TAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTAT 72586 | | | | |||||| | || ||| | | | | ||||||||| | ||||||| || | Sbjct 53774 TTATCGTATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTT 53715 Query 72587 CATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAG 72646 ||| | | |||||||| | |||||||| |||||| ||||| || |||||| | || | Sbjct 53714 CATTCCGTTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTG 53655 Query 72647 CATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCAC 72706 || |||||||||| | | || ||| |||| ||||| || |||||||| |||||||| | Sbjct 53654 CAACTGCAGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTC 53595 Query 72707 TAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAA 72766 | ||||| || || || |||||||||||| |||| ||||| || || |||||||| || | Sbjct 53594 TTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTA 53535 Query 72767 TGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAA 72826 ||||||| ||||| ||| || ||||| ||| | ||||||||| || ||| ||| | Sbjct 53534 TGCACCCATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTA 53475 Query 72827 TGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCA-- 72884 ||||||||||||| || ||||| || || ||| | || || || |||||| || ||| Sbjct 53474 TGCACGGTTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAAC--GAATCAGC 53417 Query 72885 AAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGG 72944 ||| || || |||||||||||||||||||| || || |||||||| |||||||| || Sbjct 53416 TAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGG 53357 Query 72945 ATACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTT 73004 |||||||| | | |||||||| || || |||||||||||||| |||||| | ||||| Sbjct 53356 TTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTT 53297 Query 73005 CTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAAT 73064 |||||||||| | | |||||| | | | ||||| || | | ||||| | ||| || Sbjct 53296 CTTCCTCGCTATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTAT 53237 Query 73065 GGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGAT 73124 ||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||| | | Sbjct 53236 GGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGG-ACGTG 53178 Query 73125 TGTACCA-ACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATG 73183 || | | ||||||| ||| || | ||| | || |||||||| |||||||| ||||| | Sbjct 53177 TGATCAACACATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACG 53118 Query 73184 AAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTG 73222 | | || || |||||||||||||| ||||| ||||||| Sbjct 53117 AGCGTAACGCTCACAACTTCCCACTTGACCTCGCATCTG 53079 Score = 529 bits (586), Expect = 2e-145 Identities = 739/1033 (72%), Gaps = 35/1033 (3%) Strand=Plus/Minus Query 73376 GATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGTCTTTTACTTTTA 73435 ||||| ||| | ||| | || |||||||||||| | || |||||||| |||||| | || Sbjct 62470 GATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGGTCTGGACTTTTATTATTC 62411 Query 73436 CCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTCGTGACCTCATGG 73495 || ||||| ||| | ||| | || || ||| | ||||| || ||||| || |||||| Sbjct 62410 CCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAACAACATTCGTAACTTCATGG 62351 Query 73496 TACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTAACTGCAGCAGTA 73555 |||||||| ||| | ||| ||||| ||||| || || || | ||| |||||||| Sbjct 62350 TACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAACTTCCTCACTTCAGCAGTA 62291 Query 73556 TCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTC--CTTTGGGGACCAGAGGCAC 73613 ||||| || | || |||| || | || || ||| |||||||||||||| |||| Sbjct 62290 TCAACGCCATCAAACGCGATGG--CACACTCACTTCTTCTCCTTTGGGGACCAGAAGCAC 62233 Query 73614 AAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTAGCATTACATG 73673 |||| || | ||| |||| |||| | |||||| |||||| || ||||| | || | Sbjct 62232 AAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGACATTCGTAGCTCTTCACG 62173 Query 73674 GAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGA 73733 ||| |||||| | || || || |||||| | || ||||| ||||| | || | Sbjct 62172 GAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAATTGCTCGTGCAGTACAAA 62113 Query 73734 TACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACGAGCATCTTT- 73792 | ||||| |||||||| | || || |||||| || || || || | |||| | Sbjct 62112 TTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGTGTTT----GTATCTGTA 62057 Query 73793 ---CTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCA 73849 || || || || | || || |||||||||| ||||| ||||| ||||| || Sbjct 62056 TTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATCATTTGGTGTAGCT 61997 Query 73850 GCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTT 73909 | ||| || |||| |||| | ||| | || ||||||||||| || ||||| ||||| Sbjct 61996 GGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGACACTTAACCCATTC 61937 Query 73910 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 73969 || |||||||| ||||| ||| |||| |||| |||| | || ||||| || || || ||| Sbjct 61936 CACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGCAATTCACGGAGCA 61877 Query 73970 ACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAATCT 74029 || ||| |||||||| | | ||||| ||| ||| |||| | Sbjct 61876 ACTGTAGAGAACACACTTTTCGAAGATGG------------TGATGGT-----TCAAAC- 61835 Query 74030 ACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATAGTATGATTACTGCT 74089 || ||| | |||||| | || || || | |||||||||||| ||| | || ||| Sbjct 61834 ---ACATTCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCT 61778 Query 74090 AACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACTTC 74149 ||| | |||||||||||||| || ||| |||| || |||||||| | | | |||||| Sbjct 61777 AACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTC 61718 Query 74150 CTTATGTTGTTCGTACCTGTCA-TGGGTATGTGGACATCATCTATAGGTATCGTAGGTCT 74208 | ||| | ||||||||||| | ||||| | |||| ||| | | || | ||||| | Sbjct 61717 TTCATGCTCTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATT 61659 Query 74209 AGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCC 74268 |||||||||||| | ||||||||||| ||||| |||||||| | || |||||||| || Sbjct 61658 AGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCC 61599 Query 74269 AGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGAT 74328 ||||| ||||| |||||||| ||||||||||||||||| ||||| || | |||||||| Sbjct 61598 TGAGTTCGAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGAT 61539 Query 74329 GTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAGG 74388 | || || ||||| || ||||| ||| |||| ||||| || || || | ||||| || Sbjct 61538 GGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGG 61479 Query 74389 CAACGCACTATAA 74401 ||||| || ||| Sbjct 61478 AAACGCTCTTTAA 61466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572873449620680