Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq16 122 7e-23 seq12 107 2e-18 >seq16 Length=955652 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||||| || ||||||||||| || | ||| ||| || | Sbjct 707512 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707453 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| ||||| | || |||||| Sbjct 707452 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707393 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || ||||| ||| | || || | |||||| |||| ||||||||| Sbjct 707392 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707333 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 || || || || |||||||||||| ||||||| Sbjct 707332 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTT 707301 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||||| || ||||||||||| || | ||| ||| || | Sbjct 707740 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707681 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| ||||| | || |||||| Sbjct 707680 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707621 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || ||||| ||| | || || | |||||| |||| ||||||||| Sbjct 707620 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707561 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 || || || || |||||||||||| ||||||| Sbjct 707560 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTT 707529 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||||| || ||||||||||| || | ||| ||| || | Sbjct 707968 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTTGAGTCTTCC 707909 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| ||||| | || |||||| Sbjct 707908 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCAG 707849 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | |||| || ||||| ||| | || || | |||||| |||| ||||||||| Sbjct 707848 CAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAAC 707789 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 || || || || |||||||||||| ||||||| Sbjct 707788 ATCCAGAAGGAGTCTACGTTGCACTTGGTGTT 707757 >seq12 Length=1122692 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110288 AAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTCGGCCAG 110347 |||||||| || || |||||||| || ||||| ||| | || || ||| | | Sbjct 917153 AAAACTTTGACTGGGAAAACCATCACGCTCGAAGTCGAGTCCTCGGACACGATCGACAAC 917094 Query 110348 GTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTAT 110407 || ||| ||| ||| ||||| || ||| | || ||| || || || | |||| Sbjct 917093 GTGAAAGCGAAAATTCAAGACAAGGAGGGCATTCCGCCGGACCAGCAGCGATTGATTTTC 917034 Query 110408 GCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCT 110467 || ||||||||| | || || | ||||| | |||||||||||||| ||||||||||| Sbjct 917033 GCCGGTAAACAGTTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAATCA 916974 Query 110468 ACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || |||||| ||||||| | ||||||| || Sbjct 916973 ACCTTGCACTTGGTGTTGCGTTTGCGAGGCGG 916942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841494338353