Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq14 138 2e-26 seq1 127 3e-23 seq17 120 5e-21 seq19 114 2e-19 seq16 113 7e-19 >seq14 Length=1037991 Score = 138 bits (152), Expect = 2e-26 Identities = 229/328 (70%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 793890 GTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCG 793949 |||||||| | ||| |||||||| || || ||| || ||||| |||||||| | Sbjct 65881 GTGACGCCAGACTTTTGGTACTCGCCGACACGTTTCTCAAAGAAGTTCGTCTTGCCTTGC 65940 Query 793950 AGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCG 794009 | || || || |||||||| ||||||||| || || ||| | |||| | | ||| Sbjct 65941 AAAGAAATTAATTCCATCCAGTCGAACGGGTTCGCGGTGTCGTACTCCTTCGCAAAGCCG 66000 Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||| || |||| | | ||||| ||| | || ||||| | | ||| | | |||||||| Sbjct 66001 AGCTGCGAGAGCAAGTGATCGGCAACGTACTCGATGTAATCTCTCATCATGTCGGCGTTC 66060 Query 794070 ATGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 ||||||| |||||| ||| |||| || |||| |||||||| ||||| || || || || Sbjct 66061 ATGCCGACGAGCGCGCAC-GGCAACGCGTCGCACACAAACTCCTTCTCAATTTCAACCGC 66119 Query 794129 CTCGATGATGATCTGCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAG 794188 |||| | | |||| || | || |||| ||| | | ||||||||| || Sbjct 66120 CTCGGTAACAATCTTTCTCAACTTCTCCTCGCCCGGCGTGTTGTTCAACATCGTGTAAAG 66179 Query 794189 CAGGCAGGCAAAGTCGCAATGCAGACCT 794216 || ||| ||||| || | |||| |||| Sbjct 66180 CAAGCACGCAAAATCTCTGTGCAAACCT 66207 Score = 87.8 bits (96), Expect = 3e-11 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| | |||||| |||||| ||| ||| || ||||| | ||| | ||| Sbjct 66204 ACCTTCGTCTCTGGAGATCAACTCGTTGGAGAAGGTGAGCCCCGGCATCATGCCTCTCTT 66263 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| |||| | |||||| ||| ||||| |||||||| |||||| ||| || Sbjct 66264 CTTGAGCCAGTAGATTGAGCAGAAAGAGCCGGAGAAGAAGATGCCTTCGACGCAGGCGAA 66323 Query 794460 GCCGACGAGCCGCTCGGCAAA 794480 |||| | || ||||| || Sbjct 66324 CGCGACCAAACGTTCGGCGAA 66344 >seq1 Length=1352724 Score = 127 bits (140), Expect = 3e-23 Identities = 186/263 (71%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || | |||||||||||| || ||||| ||||| || | | ||||| || Sbjct 26025 TGGTCCACGTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGAG 26084 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||| ||||| | ||| | | |||||| | | ||| | || || Sbjct 26085 GTACCGTTTGTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAAACCA 26144 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || |||||||| | |||||| ||| |||||| | |||| ||| |||||||| || || Sbjct 26145 ATACCGCCGGCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTCA 26204 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||||| |||||||| | || ||||||||| ||| |||||| |||| ||| ||| Sbjct 26205 ATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGTACCG 26264 Query 2073781 GCATTGAAGAGCGTGGGCGTCGC 2073803 || ||||| | || |||| ||| Sbjct 26265 GCGTTGAACAAGGTTGGCGACGC 26287 Score = 125 bits (138), Expect = 1e-22 Identities = 122/155 (79%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCC--GGTTCTCCTCC 2071917 ||| |||| ||| |||||||| |||||||| | || || || | | |||| ||| Sbjct 25871 CATGAACAAATCGTTCGTCCACAAACCGTAAAACAAGTCACGAGCTCTCGCTTCT--TCC 25928 Query 2071918 TTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGG 2071977 || |||||||||||| || |||||||||||||| || ||| | ||||||||| || ||| Sbjct 25929 TTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAGTGCCACGGTTCGAGG 25988 Query 2071978 TAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || |||||| |||||||||||||| |||||||| Sbjct 25989 TAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCC 26023 Score = 120 bits (132), Expect = 5e-21 Identities = 170/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 1485476 TGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCA 1485535 ||||||| |||||||| || || |||||||||||| |||||| ||| || ||| ||||| Sbjct 891234 TGGTGACAGCCTTGGTCCCTTCGGAGACGGCGTGCTTGGCCAATTCACCCGGCAAGATCA 891175 Query 1485536 GGCGCACGGCGGTCTGGATCTCGCGG---GTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 || |||| || ||||| || | | || || ||| || |||||| || | Sbjct 891174 ATCGAACGGACGTTTGGATTTCTCTGGACGTCACGGTCGGCTT---CTTGTTGTATCGGG 891118 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 ||| | |||| || || |||| |||| |||||||||| || |||||||||| Sbjct 891117 CCAACTTGGCGGCTTCAGTCGCGATCTTTTCGAAGATGTCGTTGATGAAGGAGTTCATGA 891058 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 | ||||| ||| ||||||||| ||| |||||||| ||||| | |||||||| Sbjct 891057 TGCTCATCGCCTTGGAGGAGATGCCGGTGTCCGGGTGCACTTGCTTCAAGACCTTGTA 891000 >seq17 Length=937610 Score = 120 bits (132), Expect = 5e-21 Identities = 172/241 (71%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| |||||||| || || || ||||||||| |||||| ||| || ||| || Sbjct 270310 ACTTGGTGACCGCCTTGGTCCCTTCCGACACGGCGTGCTTGGCCAATTCACCCGGCAAGA 270369 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGG---GTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| | ||||| || ||||| || | | || || ||| || |||||| | Sbjct 270370 TCAATCTCACGGACGTTTGGATTTCTCTGCTCGTCACGGTCGGCTT---CTTGTTGTATC 270426 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||| | |||| || || |||| |||| |||||||||| || ||||||| Sbjct 270427 TCGCCAACTTGGCGGCTTCCGTCGCGATCTTTTCGAAGATGTCGTTGATGAAGGAGTTCA 270486 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| ||||||||| ||| |||||||| ||||| | ||||||| Sbjct 270487 TGATGCTCATCGCCTTGGAGGAGATGCCGGTGTCCGGGTGCACTTGCTTCAAGACCTTGT 270546 Query 1485710 A 1485710 | Sbjct 270547 A 270547 >seq19 Length=1019276 Score = 114 bits (126), Expect = 2e-19 Identities = 169/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 1485476 TGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCA 1485535 ||||||| |||||||| || || |||||||||||| |||||| ||| || ||| ||||| Sbjct 476820 TGGTGACAGCCTTGGTCCCTTCGGAGACGGCGTGCTTGGCCAATTCACCCGGCAAGATCA 476879 Query 1485536 GGCGCACGGCGGTCTGGATCTCGCGG---GTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 || |||| || ||||| || | | || || ||| || |||||| || | Sbjct 476880 ATCGAACGGACGTTTGGATTTCTCTGGACGTCACGGTCGGCTT---CTTGTTGTATCGGG 476936 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 ||| |||| || || |||| |||| |||||||||| || |||||||||| Sbjct 476937 CCAATTTCGCGGCTTCAGTCGCGATCTTTTCGAAGATGTCGTTGATGAAGGAGTTCATGA 476996 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 | ||||| ||| ||||||||| ||| |||||||| ||||| | |||||||| Sbjct 476997 TGCTCATCGCCTTGGAGGAGATGCCGGTGTCCGGGTGCACTTGCTTCAAGACCTTGTA 477054 >seq16 Length=955652 Score = 113 bits (124), Expect = 7e-19 Identities = 209/306 (68%), Gaps = 7/306 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| ||||||||||| |||||| ||| | || ||| | || | |||| Sbjct 698008 CCTTCGTCTCGACTGATCAACTCGTTGGAAAACGTCAAACCTTTCATCAATCCTCTCTTC 697949 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || |||||||||||||| ||||||||||| ||| || ||||| || ||| || || Sbjct 697948 TTTAGCCAAAAGATGGCGCAGAAACTGCCGCTGAAGAAAATGCCTTCCACGCATGCGAAA 697889 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTG--TTGATCCACTTCATCGCCC 794518 ||||| | || |||||||| || ||| | | | |||||| |||||||||| Sbjct 697888 CCGACTAAACGTTCGGCAAA-----CCTCGCCGACGAAGACTCGATCCATTTCATCGCCC 697834 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | || ||||| || |||| | || | ||| | || || ||||| | | ||||| Sbjct 697833 AATCCGCCTTCTTTTTCACGGTTGGAATCGTATGAATCGCTCGAAACAAATTTCTCTTCT 697774 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | ||||| || ||||| || || | | | || ||| || || ||| || || | Sbjct 697773 GAATTGGGTCTTTCACGTACGTCTCTAACAACAACGCGTACGTTTCGCTGTGAATATTCT 697714 Query 794639 CGATGG 794644 |||||| Sbjct 697713 CGATGG 697708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244166134219