Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq17 132 4e-26 seq12 122 7e-23 seq16 107 1e-18 seq7 102 6e-17 >seq17 Length=937610 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||||| ||||| || | ||||||||||||||||||||||| || || Sbjct 351325 CCGCCGCGCAAACGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGCT 351384 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | |||||| || || | ||||||| |||||||||||||| Sbjct 351385 AAAGTTCGGCCATCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCGGG 351444 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | ||| ||||| | || | |||||| ||| || ||| Sbjct 351445 ATGCCCTCTTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCGACT 351504 Query 29740 TCAAGAGTTATAGTTTTGCCAGT 29762 || || || || || ||||| || Sbjct 351505 TCGAGGGTGATCGTCTTGCCCGT 351527 >seq12 Length=1122692 Score = 122 bits (134), Expect = 7e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||||| |||||| || | || ||||||||||| ||||| |||||||| Sbjct 916942 CCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCG 917001 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || | ||||| || || | ||||||| ||||| ||||||||| Sbjct 917002 AGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGA 917061 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| |||||| | ||| || | || | ||||| || || || Sbjct 917062 ATGCCCTCCTTGTCTTG-AATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGAC 917120 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTA 29772 ||| || || || ||||| ||||| || |||||| Sbjct 917121 TTCGAGCGTGATGGTTTTCCCAGTCAAAGTTTTA 917154 >seq16 Length=955652 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||||||||| |||||| || | ||| || || || || ||||| ||||| || Sbjct 707514 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707573 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || | || || || || | ||||||| |||||||||||||| Sbjct 707574 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707633 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || ||||| | || | ||||| ||| || ||| Sbjct 707634 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 707693 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| || || || || || || ||||| Sbjct 707694 TCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||||||||| |||||| || | ||| || || || || ||||| ||||| || Sbjct 707742 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707801 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || | || || || || | ||||||| |||||||||||||| Sbjct 707802 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707861 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || ||||| | || | ||||| ||| || ||| Sbjct 707862 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACT 707921 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| || || || || || || ||||| Sbjct 707922 TCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||||| |||||| || | ||| || || || || ||||| ||||| || | || | Sbjct 707295 AAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTG 707354 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 || || | || || || || | ||||||| |||||||||||||| ||||| || Sbjct 707355 CCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCC 707414 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 |||||||| | || ||||| | || | ||||| ||| || ||||| | || Sbjct 707415 TTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTG 707474 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||||||||| || || || || || || ||||| Sbjct 707475 ATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 >seq7 Length=519835 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || || || |||| || | |||||| || | |||||| ||||||||||||||||||||| Sbjct 260356 TGCCCGCCTCTCAGGCGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCC 260415 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 || | ||||| || || | ||||| || || | ||||| | ||||| || || Sbjct 260416 GCCAAAGTGCGTCCGTCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGA 260475 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 || || || || |||||||| | ||| ||||| | || | ||||| || ||| Sbjct 260476 GGGATGCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCC 260535 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGT 29762 ||||| | || || |||||||| || Sbjct 260536 ACTTCCAAGGTGATCGTTTTGCCCGT 260561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219101407961