Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq21 778 0.0 >seq21 Length=72700 Score = 778 bits (862), Expect = 0.0 Identities = 761/977 (78%), Gaps = 3/977 (0%) Strand=Plus/Minus Query 177567 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177626 ||| | ||||| || | ||||| | || |||| |||||||| ||| | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 177627 ACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGA 177685 || | || |||| ||| |||| |||||||| || ||| |||| ||||| || ||||| Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 177686 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 177745 |||||| || || ||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 177746 TGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 177805 |||||| || || || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 53878 TGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 53819 Query 177806 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 177865 || |||||||||||||||| || |||||||| |||| ||| || | || | |||||| Sbjct 53818 AGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTT 53759 Query 177866 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTAT 177925 | | ||||| | | | |||| ||||| ||||||||||| ||||||| |||| |||| || Sbjct 53758 CTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAAT 53699 Query 177926 GCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCT 177985 ||| || |||||| ||| || |||||||| ||||| ||||| ||| | ||||| || | Sbjct 53698 GCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCAT 53639 Query 177986 AGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 178045 | || || |||| || || || ||||| || | ||||||||||||||| ||||| || Sbjct 53638 CATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAAC 53579 Query 178046 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACAT 178105 ||| |||| |||| | |||||||| || || ||||| |||||||||||||| |||||||| Sbjct 53578 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 53519 Query 178106 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 178165 ||| || || ||||| ||||||||||| || ||||||||||||||||| || ||||| Sbjct 53518 GCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGT 53459 Query 178166 TACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTT 178225 |||||||| || ||||||| || || || | || || ||| || |||||||| Sbjct 53458 AACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTT 53399 Query 178226 CGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 178285 ||||||||||||||| || || ||||| || || || || ||||||||||| ||| | || Sbjct 53398 CGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTAT 53339 Query 178286 CTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCC 178345 ||||||||| || || ||||||||||| |||||||| |||||||||||||| ||||| Sbjct 53338 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCC 53279 Query 178346 TGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGG 178405 |||| | |||||||||||||| || |||||| | || || ||||| || ||||| || || Sbjct 53278 TGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGG 53219 Query 178406 ATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGA 178465 |||||||||||||||||| | | || | | |||||||| ||||||||||||| || Sbjct 53218 ATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGA 53159 Query 178466 CGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACT 178525 | | |||||||| || || |||||||| |||||||| | || || || |||| Sbjct 53158 TATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAA-CGCTCACAACT 53100 Query 178526 TCCCGCTTGATCTTGCA 178542 |||| ||||| || ||| Sbjct 53099 TCCCACTTGACCTCGCA 53083 Score = 641 bits (710), Expect = 5e-179 Identities = 767/1035 (74%), Gaps = 5/1035 (0%) Strand=Plus/Minus Query 178933 GGCTGGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGG 178992 || |||||||| | | |||||||||||||| || || || || || || || |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 178993 TCTGGACTCCTACTTCTTCCCAC-TGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGAC 179051 |||||||| || || |||||| ||| || |||| |||| || ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 179052 AGCTTTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAA 179111 | | || || || |||||||| || ||| | || ||||| || |||||||| ||| Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 179112 CTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 179171 ||| || || |||| || || ||||| | | || |||| || || |||||||| || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 179172 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAA 179231 |||||| || || | || || | ||| || ||||| |||||||| ||| |||||| Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 179232 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACT 179291 ||||| ||||| ||||| || || | |||| ||||| ||||||||||| |||||| | Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 179292 GGCACGTCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGT 179351 || ||| | || ||||| ||||| |||||||| || | | || ||||| || Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 179352 ATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATC 179411 || || |||||| || || ||||||||||| ||||| ||||||||||||| ||||| Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 179412 GTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGAC 179471 |||||||| || | || || | || | |||||||| |||||||||||||||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 179472 ACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGC 179531 ||| ||||| || |||||||||||||| || ||| | || |||| || || || | ||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 179532 TATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATT 179591 ||||| |||| |||||||||||| ||| | | |||||||| || |||||||||| Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATT 61830 Query 179592 TAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTT 179651 || ||| || | || |||| || ||||| || || ||||| || || |||||||| Sbjct 61829 CCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTT 61770 Query 179652 TTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCT 179711 ||||| ||||| ||||| || | || || ||||||||| | |||||||| | ||| Sbjct 61769 CTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCT 61710 Query 179712 GTTTGTTCCTGTCA-TGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTA 179770 || || ||||| | ||||| | ||| | || | |||| | | || |||| |||| Sbjct 61709 CTTCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTA 61651 Query 179771 ATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCG 179830 | || ||||| || || || || ||||||||| | || ||||||||||||||||||| Sbjct 61650 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCG 61591 Query 179831 AGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTG 179890 | || ||||| || |||||||||||||| || |||||| | ||||| ||| ||||| || Sbjct 61590 AAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTC 61531 Query 179891 CTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCAC 179950 ||||| || ||||||||| | | ||||| || || || || || |||| ||||| | Sbjct 61530 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 61471 Query 179951 TGTGATTCAATCTCT 179965 | | |||||| |||| Sbjct 61470 TTTAATTCAA-CTCT 61457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605667041012360