Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq6 138 8e-27 seq15 120 2e-21 >seq6 Length=663424 Score = 138 bits (152), Expect = 8e-27 Identities = 150/198 (76%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 ||||||| ||| || || || | ||||||||| || | | |||| ||| ||| | Sbjct 519842 AACATCAAAGGTACCTCCTCCGAGATCAAAAAT---TAAAATGGTTTCATTGGCTT---T 519895 Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 | | |||| |||||| |||| | ||||||||| |||||||| || || | |||||||| Sbjct 519896 TCTCTCAAAACCATATGCAAGCGAAGCAGCAGTCGGTTCATTGATGATACGCAAAACATC 519955 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 || ||||||||| || |||||||| ||||||||||| || |||||| ||||| || Sbjct 519956 AATACCAGCAATCTGCCCGGCATCTTTTGTGGCTTGTCTCTGACTATCGTTGAAATACGC 520015 Query 282454 AGGAACAGTAATAACGGC 282471 |||||| ||||| || || Sbjct 520016 AGGAACTGTAATCACAGC 520033 Score = 134 bits (148), Expect = 1e-25 Identities = 331/498 (66%), Gaps = 8/498 (2%) Strand=Plus/Plus Query 281315 TCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCG 281374 ||| ||||||||| ||||||| | ||| | ||||||| |||| ||| | ||| || Sbjct 465406 TCTGCAAATTCTTCAGCTTCTTCGACCATACGTTCAATTTCTTCTTGAGAAAGTCTCCCT 465465 Query 281375 CGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACA 281434 || || || |||||||| |||| ||||| ||| |||||| | ||| ||| Sbjct 465466 TTATCGTTTGTTATAGTAATTTTCTCTGATTTACCAGTTCCTTTATCTTCCGCACCGACA 465525 Query 281435 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 281494 |||||||| ||||| ||||| | ||||| || || || ||||| || || || || | Sbjct 465526 TTAAGAATCCCATTCGCATCAATTTCAAACGTAACCTCGATTTGTGGAACACCCCTGGGT 465585 Query 281495 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 281554 ||||| || || | | |||| | || || || |||||| || || | | Sbjct 465586 GCAGGGGGAATTGACGTGAGTTCAAATTTACCAAGTAAATGATTATCCTTGGTCATGGCT 465645 Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTA 281611 | ||||||||| |||| || | | | |||||| ||||||||| ||| |||||| Sbjct 465646 CTTTCACCCTCAAAAACCTGTA---TCATCACAGTTTGCTGATTATCTTGATATGTTGTA 465702 Query 281612 AATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 || | | || |||||||| || || || || | || | || ||||||| Sbjct 465703 AA-AGTTTGAGATTTTTTTGTCGGTATGACAGTATTACGTGGGATCAACTTCGTCATAAC 465761 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 |||||| ||||||| | ||| | | ||||| | ||||||| || | || | | Sbjct 465762 GCCACCAACTGTTTCAATACCTTGTGTCAGAGGTGCTACATCAAGGAGAAGTATGTCCTT 465821 Query 281731 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 || ||| | || ||| | ||| | |||| | ||||||||||||||||| Sbjct 465822 CGTTTCATCACCCCCTTCGCCAGATAAAATCCCGCCTTGGACTGCAGCACCATATGCAAC 465881 Query 281791 AGCTTCATCAGGATTAAC 281808 ||||||||| || || || Sbjct 465882 AGCTTCATCTGGGTTCAC 465899 Score = 116 bits (128), Expect = 3e-20 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 ||| ||||| |||| ||| || ||||||| || |||||||| | ||||||| Sbjct 466926 TCTCCCAATCAATCTTTTAGCGTCAAAAACGGTTCGTGTTGGATTGGAGGTGGCTTGATT 466985 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 ||| || |||||||| |||||| | || || || ||||||| ||| || |||||||| | Sbjct 466986 TTTTGCAGCATCTCCGATCAGACGCTCAGTATCCGTAAATGCAACGTAAGATGGAGTAAT 467045 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATT 282828 | ||| ||||| ||||| ||||| ||||||||||| || || Sbjct 467046 CCTATTGCCTTGGTCATTTGCAATTATTTCAACTTTCCCGTT 467087 Score = 107 bits (118), Expect = 1e-17 Identities = 193/281 (69%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 281437 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 281496 |||||| ||||| ||||| | ||| || |||||||||| || || || || | |||| Sbjct 519008 AAGAATTCCATTCGCATCTATATCGAACTTGACTTCAATCTGCGGAACTCCACGGGGAGC 519067 Query 281497 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 281556 | ||| || || |||||| ||| | || ||| | ||||||||||| || | || Sbjct 519068 GGATGGTATTCCATCCAAACGAAAGTTGCCAAGACTTTTATTATCTTTCACAAACTCTCT 519127 Query 281557 TTCACCCTCGAAAATTTGGATAGTAACTACA---GTTTGATTATCTGAATAAGTTGTAAA 281613 |||||| | |||| | || | ||||| ||||| ||| | | || | || Sbjct 519128 TTCACCTTGCAAAA---CGTTAATTTCTACACTGGTTTGGCCATCAGCAGCGGTGGAGAA 519184 Query 281614 TACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673 ||| ||||| | ||| | ||||||||||| | ||| | || ||||||| ||| Sbjct 519185 AACTTCAGATTTCGAAGTAGGTAATGTTGTGTTTCGAGGAATGAGCTTCGTCATAACACC 519244 Query 281674 ACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714 ||| |||||| | ||||| ||||| |||||||| |||| Sbjct 519245 CCCAAGTGTTTCAAGTCCAAGTGAAAGCGGAGTGACGTCAA 519285 Score = 100 bits (110), Expect = 2e-15 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| || |||| | |||||| || || ||||| | ||||||| ||| | |||| Sbjct 466404 TCAATAGTTAAAATGGAAACATCGAATGTGCCTCCACCAAGGTCAAAAACAAGAATATTC 466463 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 | || | ||| | || ||||||||||| || | || || ||||| |||||||| Sbjct 466464 TTCTC---GCCTT---TCTTGTCAAGACCATAGGCGATGGCCGCCGCAGTAGGTTCATTG 466517 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 |||||||| ||| || || || || ||| | || |||||||| || ||||| | ||| Sbjct 466518 ATAATTCTTGCAACGTTGAGTCCCGCGATTGTCCCCGCATCTTTTGTTGCTTGACGCTGT 466577 Query 282437 GAATCGTTAAAATATGC 282453 | ||| || |||||||| Sbjct 466578 GCATCATTGAAATATGC 466594 >seq15 Length=989707 Score = 120 bits (132), Expect = 2e-21 Identities = 736/1167 (63%), Gaps = 44/1167 (4%) Strand=Plus/Minus Query 281330 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 281389 |||||| | |||||| || || | || | || |||||||| | || || || Sbjct 626478 GCTTCTTGGACCATTCTTTCGATGTCTTCCTTGGACAATCTTCCCTTGTCGTTGGTGATG 626419 Query 281390 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 281449 ||||| || || || | || || ||||| | |||| ||| || | ||||| || Sbjct 626418 GTAATCTTATTCTTTTGGCCGGTGGACTTATCTTCCGCAGACACGTTCAAGATACCGTTC 626359 Query 281450 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 281509 || || | || || ||| | ||||| ||||| |||||| | || || ||||| ||| Sbjct 626358 GCGTCGATGTCGAAGCAGACGTTGATTTGCGGGACGCCTCTCGGCGCCGGCGGGATGCCT 626299 Query 281510 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT----GAATTTTCGTTCACCCTC 281565 | ||| | |||| | |||| || || ||| | || ||| ||||| || || Sbjct 626298 TGCAATTCAAATTTACCCAACAAGTTGTTGTCTCTCGTTCGCGAA----CGTTCGCCTTC 626243 Query 281566 GAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTT 281625 ||||| |||||| || | | || || || ||||| || | || ||| ||| Sbjct 626242 GAAAACTTGGATCAACACGCCCGGCTGGTTGTCAGAATACGTGGAGAACACTTGTTCTTT 626183 Query 281626 TTTACAAGGAATTGTTGTGTTTCT----ATCAATAATATTGGTCATAATACCACCAGCTG 281681 || || || || |||||||| ||||| | |||||| | ||| || | | Sbjct 626182 CTTGGTCGGGATCGTCGTGTTTCTCGGGATCAACAC----GGTCATGACACCGCCGACGG 626127 Query 281682 TTTCTAAACCAAGAGAAAGAGGAGTGACATC-AACTAGGACAATATTTTGAAGTTTTTCA 281740 |||| ||||| | || | || ||||| || ||| | |||| | ||| | ||||| Sbjct 626126 TTTCCAAACCCATCGACAACGGCGTGACGTCCAACAACAACAAG-TCTTGGACCTTTTCG 626068 Query 281741 TCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 281799 | | || || |||| ||| || ||||| | || || || || || || ||||| || Sbjct 626067 TTACCTTCGCCGGACAA-AATGGCAGCTTGGACGGCGGCGCCGTACGCGACGGCTTCGTC 626009 Query 281800 AGGATTAACAG--TTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857 || || | | || || | | || || ||||| || | || || | ||| Sbjct 626008 CGGGTTGATGGACTTGCAC--AACTCCTTGCCGTTGAAGAAGTCGGAGAGCAATTGCTGA 625951 Query 281858 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 281917 ||||| || || | | || || || || || || | ||| || || || || || Sbjct 625950 ACCTTCGGGATTCTCGTGGAACCGCCGACCAAAACGACTTCGTGGACTTGGCCCTTGTCG 625891 Query 281918 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC--TG 281975 | || | ||| || || || || ||||| | | | |||||||| || Sbjct 625890 AACTTGGCATCTCTCAAGCACTTCTCGACTGGTTCCATGCACTTGCGGAACAAGTCCATG 625831 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 282035 ||| ||||||||| | ||||| || | | | | |||| || |||||||| | Sbjct 625830 TTCAAC--TCTTCGAATCTCGCTCTCGTGATGGAGGTGTAGAAATCGATACCTTCGAATA 625773 Query 282036 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095 | || || | ||| || | ||||| | | || || | | | || || | ||| | Sbjct 625772 AGGAGTCGATTTCGATGGAGGTTTGCGCGGTGGAGGACAAAGTTCTCTTGGCTCTTTCGC 625713 Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATAT--TT 282153 | || || |||| | || || ||| | || ||| | || | || | | || Sbjct 625712 ACGCGGTTCTTAAACGTCTCAACGCTCTGGCG--TTGCCGGAGATGTCCTTCTTGTGCTT 625655 Query 282154 TCTCTTGAAATCTTCAACACACCATGTTACA-AGACGATTATCAAAATCTTCACCTCCCA 282212 ||||||||| || | || | ||| | | |||| |||| ||||||||||| |||| Sbjct 625654 TCTCTTGAACTCCGCGGCAAAGTG-GTTGCTCAAACGAGTATCGAAATCTTCACCACCCA 625596 Query 282213 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 282272 | | || | |||| ||| || | |||| || | || ||||| | | ||| | || Sbjct 625595 AGTGCGTGTCCCCTGCCGTTGCCTTGACTTCAAAGATGCCTTCTTCGATGGTCAACAAAG 625536 Query 282273 TAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG- 282331 ||||| || || || |||| ||||||||| | || ||| |||| | | ||| Sbjct 625535 ACACATCGAAAGTACCGCCTCCCAAATCAAAAATCAACACGTTC--TTCTCCGCCGTGGA 625478 Query 282332 -------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 || || || | ||| ||||| | ||||| || || ||||| || |||||||| Sbjct 625477 CGAGTTCTTCTTGTCCAAACCGTACGCGATCGCAGCCGCGGTCGGTTCGTTGATAATTCT 625418 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 ||| || | || ||||| | ||||| || || ||||||||||| || ||||| Sbjct 625417 CAAGCAGTTCAAGCCGGCAATGACCGCCGCATCCTTGGTCGCTTGTCTTTGGGAGTCGTT 625358 Query 282445 AAAATATGCAGGAACAGTAATAACGGC 282471 ||| || || || || || | ||||| Sbjct 625357 AAAGTACGCCGGCACGGTCACGACGGC 625331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629368988746