Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 seq14 118 1e-21 seq16 116 4e-21 seq7 102 8e-17 seq12 87.8 2e-12 >seq1 Length=1352724 Score = 170 bits (188), Expect = 2e-37 Identities = 629/972 (65%), Gaps = 35/972 (4%) Strand=Plus/Plus Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 ||||| ||||| | || || ||||| || || ||||| | | || | || |||||||| Sbjct 25539 GCGATGGAGGCCAAGTTACAAACGGCAGTTTCTTCCGGCGAGGTGAATTCGACGATCTCT 25598 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | ||||| ||| |||||||| ||||| || | ||| || ||||| ||||||| Sbjct 25599 GTGCACAAGTTGGACGATTTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCAC 25658 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAAC 148997 || |||||| ||| ||||||||| ||||||||||| |||| ||| | || ||| Sbjct 25659 GCATCCTTGAACAACATGTACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAAC 25718 Query 148998 CGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCC------TCCTGCTCGTAT 149051 | | || | ||| ||| ||| | || | |||| || | ||||| Sbjct 25719 CAA---AGCTGCTGGGCG-----TTGATCGTC-TTCTTACCCTTGTTTTCTTTTTCGTAC 25769 Query 149052 AAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGC 149111 || |||| || ||| | || || |||| ||| | ||| ||||||| || | Sbjct 25770 TTGGTGTACAAAGCTTCAAACTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGTTC 25829 Query 149112 GGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACC 149171 |||||||| | || |||| ||||| | | || | ||||| |||| |||| | | Sbjct 25830 GGGCACATTAACGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTC 25889 Query 149172 CAGAGCGCGTACATGAGGTCGCGCGC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAG 149230 || | |||| | | ||| || || || || ||||| || ||| |||| Sbjct 25890 CACAAACCGTAAAACAAGTCACGAGCTCTCGC-TTCTTCCTTCCCGTGGTTCTTTCGCAA 25948 Query 149231 GTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTT 149290 || |||| | ||| ||||| | ||||||||| || | ||| | || | |||||||| Sbjct 25949 GTCGAGCCAGTCGAAGATGTCAGAGTGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTT 26008 Query 149291 GCGCTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGG 149347 |||||| |||||| ||||| |||| | | || ||| ||| ||||| |||| ||| || Sbjct 26009 GCGCTTACCGCCGCCTTGGTCCACGTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGG 26068 Query 149348 TTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACT 149405 || || | | || ||||| || |||||| |||| | | | || || | Sbjct 26069 AATGATACCGTTCGAGGTACCGTTTGTGCCTCTAATGTACGAC-GAAGTG-GCGCGGATG 26126 Query 149406 TTGTGCACGTTGAC--GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGA 149463 | ||| | | ||| || || |||||| || |||| || ||| |||||| || | Sbjct 26127 TCGTGAA--TAGACAAACCAATACCGCCGGCGGACTTGGAAATGCACGCGCATTCCTTCA 26184 Query 149464 GCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACA 149523 ||| |||||| || || ||| ||| ||||||| | || |||||||||| | | Sbjct 26185 ACGTGTCGTAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGA 26244 Query 149524 TTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAA--AATATTT 149581 |||||| |||| ||||| ||||| ||| || ||||| || | | || Sbjct 26245 GTTGCGGTCGCGGCGTACCGGCGTTGAACAAGGTTGGCGACGCGTGGGTCATCCAACGTT 26304 Query 149582 CTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTAT 149641 | | || ||| | |||| || | | || || || | ||||| || || Sbjct 26305 CAG--ACAACATGTGATACGTATCAACAGCCTTTTCGATATCCTTCTTGTGGATACCGAT 26362 Query 149642 GGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAA 149701 || || | ||||| ||| |||||||| ||||| | ||||| | || | ||| Sbjct 26363 GGATACTCTCATCAACATGTGCTGCGGGCGCTCGACAACTTTACCGTCGATGCGCAACAA 26422 Query 149702 GTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTC 149761 ||| | || | || ||| | |||||||| | ||| |||||||| ||| ||| | | Sbjct 26423 GTACGAGCGCTCCAAAGTTTTGAAACCAAAGTAGTCGTAATCAAAGTCACGGTCGTAGAC 26482 Query 149762 AATGGCGGCGTC 149773 ||| | ||||| Sbjct 26483 AATTTCCGCGTC 26494 >seq14 Length=1037991 Score = 118 bits (130), Expect = 1e-21 Identities = 305/458 (67%), Gaps = 19/458 (4%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 |||||||||||| ||||||||||| ||||| || ||||| | || ||||| | ||| Sbjct 65898 GTACTCGCCGACACGTTTCTCAAAGAAGTTCGTCTTGCCTTGCAAAGAAATTAATTCCAT 65957 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTA---TTTCGGCTGGCCCAACTGTACGAGCAG 120470 | |||||||||| ||||| | ||| |||| ||| | ||| ||||| Sbjct 65958 CCAGTCGAACGGGT---TCGCGGTGTCGTACTCCTTCGCAAAGCCGAGCTGCGAGAGCAA 66014 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 | || || || |||| ||||| || | ||| | ||||||||||| | | ||| Sbjct 66015 GTGATCGGCAACGTACTCGATGTAATCTCTCATCATGTCGGCGTTCATGCCGACGAGCGC 66074 Query 120531 CACCGGCAACGCCGACG-TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA--- 120586 |||||||| || || | ||||||||||||||| || |||||||| | |||| Sbjct 66075 GCACGGCAACG-CGTCGCACACAAACTCCTTCTCAATTTCAACCGCCTCGGT-AACAATC 66132 Query 120587 -TGGCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCAC 120645 | | | | | ||| ||| | | ||||| | | | ||| || |||| Sbjct 66133 TTTCTCAACTTCTCCTCGCCCGGCGTGT--TGTTCAA----CATCGTGTAAAGCAAGCAC 66186 Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 ||||| || |||||| || ||||| | || |||| ||||||| || || || || Sbjct 66187 GCAAAATCTCTGTGCAAACCTTCGTCTCTGGAGATCAACTCGTTGGAGAAGGTGAGCCCC 66246 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765 ||||| |||||| || |||||| || | || | | || ||| || ||||| | | Sbjct 66247 GGCATCATGCCTCTCTTCTTGAGCCAGTAGATTGAGCAGAAAGAGCCGGAGAAGAAGATG 66306 Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAA 120803 || || ||| ||| || ||||||| || ||||| || Sbjct 66307 CCTTCGACGCAGGCGAACGCGACCAAACGTTCGGCGAA 66344 >seq16 Length=955652 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||||||| ||| ||| ||| || | |||||| || Sbjct 707316 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707375 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | |||||||| || || ||||| ||||||||||| |||||| |||| Sbjct 707376 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707435 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | ||| || || | |||| ||||||||| |||| ||| Sbjct 707436 ACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707495 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 707496 TTGACGAAGATTTGCAT 707512 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||||||| ||| ||| ||| || | |||||| || Sbjct 707544 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707603 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | |||||||| || || ||||| ||||||||||| |||||| |||| Sbjct 707604 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707663 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | ||| || || | |||| ||||||||| |||| ||| Sbjct 707664 ACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707723 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 707724 TTGACGAAGATTTGCAT 707740 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||||||| ||| ||| ||| || | |||||| || Sbjct 707772 GTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCG 707831 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| | |||||||| || || ||||| ||||||||||| |||||| |||| Sbjct 707832 GCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTG 707891 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | ||| || || | |||| ||||||||| |||| ||| Sbjct 707892 ACGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGGTTTTGCCAGTCAAAGTC 707951 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 707952 TTGACGAAGATTTGCAT 707968 >seq7 Length=519835 Score = 102 bits (112), Expect = 8e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || |||| ||||||||||| || || || ||||| ||| ||| ||| || | | Sbjct 260380 AAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCCAAAGTGCGTCCGTCTTCTAAC 260439 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || ||| | || | |||||||||||| |||||||||||||||||||| ||| Sbjct 260440 TGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATT 260499 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||| | || ||||| || | ||||| |||||||| Sbjct 260500 TTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCCACTTCCAAGGTGATCGTTTTGCCC 260559 Query 133635 GTCA 133638 |||| Sbjct 260560 GTCA 260563 >seq12 Length=1122692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| || ||||| || || |||||||| | | || | ||| || | | Sbjct 916963 AAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCGAGAGTTCTCCCGTCTTCTAAC 917022 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || ||| |||| | ||||||||||| || || ||||| |||||||| ||| Sbjct 917023 TGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC-TTGAAT 917081 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || || | | || | |||||| | || ||| || |||| |||| |||||| || Sbjct 917082 TTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGACTTCGAGCGTGATGGTTTTCCC 917141 Query 133634 GGTCAGAGTTTT 133645 |||| |||||| Sbjct 917142 AGTCAAAGTTTT 917153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420673102040