Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 118 3e-21 >seq1 Length=1352724 Score = 118 bits (130), Expect = 3e-21 Identities = 312/472 (66%), Gaps = 7/472 (1%) Strand=Plus/Minus Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAA---GGTGGTAAGA 110745 |||| ||| | | || ||||||||||| || | || ||| | ||| || |||||| Sbjct 26070 TTCCGATGCTTCGCGTGTTCAACGACACGGCGAGGTACGTGGACCAAGGCGGCGGTAAGC 26011 Query 110746 GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805 | || ||| | ||||| || || |||||||| ||||| || || || || || | | | Sbjct 26010 GCAAGGGCGCTTTTGCCATTTACCTCGAACCGTGGCACTCTGACATCTTCGACTGGCTCG 25951 Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 | | || || || || || |||||| ||||| ||||| || ||||| | ||| Sbjct 25950 ACTTGCGAAAGAACCACGGGAAGGAAGAAGCGAGAGCTCGTGACTTGTTTTACGGTTTGT 25891 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925 ||| ||||| ||||||||| | || ||||||| |||| |||| | | ||||| | Sbjct 25890 GGACGAACGATTTGTTCATGAAAAGAGTCGAAGAAAACGGCAAGTGGACGTTAATGTGCC 25831 Query 110926 CTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985 | | | || ||| | || || | || |||||||||||| | ||| | Sbjct 25830 CGAACGAGTGCCCGGGTTTGTCCGAATGCTGGGGTGAAGAGTTTGAAGCTTTGTACACCA 25771 Query 110986 AATATGAAAAAGAAGGCAA-GTTTCGCAAACAAATTCCA-GCTCAAGAACTTTGGTTCAA 111043 | || ||||||||| ||| | | | | || | || | || || | |||||||| Sbjct 25770 AGTACGAAAAAGAAAACAAGGGTAAGAAGACGA--TCAACGCCCAGCAGCTTTGGTTTGC 25713 Query 111044 AATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAA 111103 || |||||| | ||||| |||||||| | || || || |||| || ||| || Sbjct 25712 GATTCTTGAAGCGCAAGTGGAAACTGGTAACCCGTACATGTTGTTCAAGGATGCGTGCAA 25653 Query 111104 TCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 ||||| || || ||| ||||| || || || || || || |||||| Sbjct 25652 CCGCAAGTCGAACCAACAAAATTTGGGCACGATCAAATCGTCCAACTTGTGC 25601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812480673181