Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7 123 2e-23 seq16 120 2e-22 seq12 116 2e-21 seq17 89.7 3e-13 >seq7 Length=519835 Score = 123 bits (136), Expect = 2e-23 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| ||||||||||| |||| ||| ||||||||| ||||| ||||| | Sbjct 260359 CCGCCTCTCAGGCGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCC 260418 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| |||| || || ||||| ||||| || ||||| |||||||| || | || Sbjct 260419 AAAGTGCGTCCGTCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGG 260478 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| |||||| | | || | ||| | |||||| |||||||| Sbjct 260479 ATGCCTTCCTTGTCTTGGATTTTC-GCCTTGACGTTGTCGATGGTGTCCGAGGATTCCAC 260537 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGA 33742 || | ||||||||||| || || | |||||| ||||| Sbjct 260538 TTCCAAGGTGATCGTTTTGCCCGTCA--CTTTTTATAAAGA 260576 >seq16 Length=955652 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| |||||||| || | || ||| || || ||||||||||||| Sbjct 707514 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707573 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || | |||| || || || || ||||| |||||||| ||||||||||| |||| Sbjct 707574 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707633 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| || ||| | | || | ||| | ||||||| || || || Sbjct 707634 ATACCTTCCTTGTCTTGGATCTTC-GCCTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 707692 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||| ||||| || || || || || || ||||| ||||| Sbjct 707693 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| |||||||| || | || ||| || || ||||||||||||| Sbjct 707742 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707801 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || | |||| || || || || ||||| |||||||| ||||||||||| |||| Sbjct 707802 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707861 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| || ||| | | || | ||| | ||||||| || || || Sbjct 707862 ATACCTTCCTTGTCTTGGATCTTC-GCCTTGACGTTGTCGATGGTGTCGGAAGACTCAAC 707920 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||| ||||| || || || || || || ||||| ||||| Sbjct 707921 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Score = 113 bits (124), Expect = 3e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 33517 TCGTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAA 33576 || || || |||| ||||| |||||||| || | || ||| || || ||||||||| Sbjct 707280 TCTTCGCCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAA 707339 Query 33577 TCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCT 33636 |||| | || | |||| || || || || ||||| |||||||| ||||||||||| Sbjct 707340 TCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCC 707399 Query 33637 TGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA 33695 |||| | |||||| ||||| || ||| | | || | ||| | ||||||| || Sbjct 707400 GGCGGGATACCTTCCTTGTCTTGGATCTTC-GCCTTGACGTTGTCGATGGTGTCGGAAGA 707458 Query 33696 TTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || | |||||| ||||| || || || || || || ||||| ||||| Sbjct 707459 CTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| |||||||| || | || ||| || || ||||||||||||| Sbjct 707970 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 708029 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| || || || || ||||| |||||||| ||||||||||| |||| Sbjct 708030 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 708088 >seq12 Length=1122692 Score = 116 bits (128), Expect = 2e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| |||||| |||||||| || | || |||||||| ||||||||||| | | Sbjct 916942 CCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCG 917001 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | |||| || || ||||| ||||| |||||||| |||||||| || |||| Sbjct 917002 AGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGA 917061 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||||||| |||| || | ||| | ||||| || || || Sbjct 917062 ATGCCCTCCTTGTCTTGAATTTTCGCTTTC-ACGTTGTCGATCGTGTCCGAGGACTCGAC 917120 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTT 33734 || | |||||| ||||| || || || ||||| Sbjct 917121 TTCGAGCGTGATGGTTTTCCCAGTCAAAGTTTT 917153 >seq17 Length=937610 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | |||||| || ||||| || | ||| |||||||| ||||| || |||| Sbjct 351325 CCGCCGCGCAAACGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGCT 351384 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || || |||||||||||||| || ||||| ||||||||||| |||| Sbjct 351385 AAAGTTCGGCCATCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCGGG 351444 Query 33643 ACACCTTCTTTGTC 33656 | || |||||||| Sbjct 351445 ATGCCCTCTTTGTC 351458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703915872320