Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq21 628 7e-176 >seq21 Length=72700 Score = 628 bits (696), Expect = 7e-176 Identities = 728/976 (75%), Gaps = 4/976 (0%) Strand=Plus/Minus Query 28642 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 28701 ||| ||||||| || | |||||| | || | || ||||| || | | ||||| || Sbjct 54057 TGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCT 53998 Query 28702 TGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGA 28760 | | |||| || |||| ||||| | |||||||| || || || ||||| || Sbjct 53997 ACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGA 53939 Query 28761 CATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATC 28820 ||| ||||| || || || || || ||||| ||| | || |||||||||||||| || Sbjct 53938 CATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 53879 Query 28821 GGGAGCCGTCGTACCGAGCAGCAAT-GCCATCGGACTACACTTCTACCCAATTTGGGAAG 28879 || || || || || | || ||| || |||||||| |||||||||||||| ||||||| Sbjct 53878 TGGTGCTGTAGTTCCTA-CATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 53820 Query 28880 CTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACT 28939 | | |||||||||| ||||| |||||||| ||||| | ||| ||| | || | |||| Sbjct 53819 CAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACT 53760 Query 28940 TCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAA 28999 || |||| || || | | | |||||||| || |||||||| ||| | || |||||| Sbjct 53759 TCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAA 53700 Query 29000 TGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCC 29059 || | || ||||| ||| || ||||| ||||| || ||||| ||| |||| || ||| Sbjct 53699 TGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCA 53640 Query 29060 TCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCA 29119 || | |||||| |||| || || ||||| |||| |||||| | |||||||| || | Sbjct 53639 TCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAA 53580 Query 29120 CCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACA 29179 | ||||||| |||| | || ||||| || || || ||||| || |||||||| ||||||| Sbjct 53579 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 53520 Query 29180 TGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTG 29239 |||| || || ||||| || |||||||| || || || ||| ||||||||||| || | Sbjct 53519 TGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCG 53460 Query 29240 TCACGTCCTCGCTTGTGCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGT 29299 | || || || ||| | ||||| || ||||| || || ||| || ||||||| Sbjct 53459 TAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGT 53400 Query 29300 TTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGA 29359 | |||||||||||||||||||| ||||| ||||| |||||||||||||| |||||| | | Sbjct 53399 TCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTA 53340 Query 29360 TCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGC 29419 |||||||||| ||||| ||||| || ||||| || ||||||||||| ||| ||||| Sbjct 53339 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGC 53280 Query 29420 CGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACG 29479 | || | || || |||||| | || | || ||||||| ||||| || || || |||| Sbjct 53279 CTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACG 53220 Query 29480 GTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTG 29539 | || ||||| |||||||| | | || || || ||||| || || || ||||||| Sbjct 53219 GATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTG 53160 Query 29540 ATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACT 29599 || || | || || |||||||| || | ||||||||||| |||||||| ||||| |||| Sbjct 53159 ATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 53100 Query 29600 TCCCACTTGATCTGGC 29615 |||||||||| || || Sbjct 53099 TCCCACTTGACCTCGC 53084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146665563425266