Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq21 600 3e-167 >seq21 Length=72700 Score = 600 bits (664), Expect = 3e-167 Identities = 711/958 (74%), Gaps = 4/958 (0%) Strand=Plus/Minus Query 18745 ACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 18804 || || |||||| | || ||||| ||||| || | | ||||| || | | || Sbjct 54045 ACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCCTACATTATTAACA 53986 Query 18805 GCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCAT 18863 |||||| | ||| ||||| | || ||||| || || ||||| || ||||| ||||| || Sbjct 53985 GCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGACATCGATGGTAT 53927 Query 18864 CCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGT 18923 || ||||| || | || ||| | || |||||||||||||| || || || || || Sbjct 53926 TCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAGT 53867 Query 18924 TCCGAGCAGCAAT-GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTG 18982 ||| | || ||| || |||||||| |||||||||||||| |||||||| | |||||| Sbjct 53866 TCCTA-CATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTACACTTG 53808 Query 18983 ATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCG 19042 |||| ||||| |||||||| ||||| | ||| ||| | || | |||||| |||| || | Sbjct 53807 ATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAG 53748 Query 19043 TCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGA 19102 | | | | |||||||| || |||||||| ||| | || |||| ||||| ||||||| Sbjct 53747 TATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAATGCGTCCTTGGA 53688 Query 19103 TTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCAT 19162 | ||| || ||||| |||||||| || || || |||| || ||| | | || ||| Sbjct 53687 TCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCATCATTTACCCAA 53628 Query 19163 TTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACA 19222 | || || || || || |||| ||||||| | |||||| ||| || ||||||| || Sbjct 53627 TCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAACTTTCAACTTCA 53568 Query 19223 TGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCG 19282 || | |||||||||||||| || |||||||| |||||||| ||||||||||| || || | Sbjct 53567 TGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGAGTAG 53508 Query 19283 CTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 19342 ||||||| ||||| || ||||| || ||| ||||||||||| || || || || || | Sbjct 53507 CTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCGTAACTTCTTCAC 53448 Query 19343 TTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAG 19402 || | |||||||||||||| | | ||| ||| || |||||||| || ||||||| Sbjct 53447 TTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGTTCGGACAAGAAG 53388 Query 19403 AAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACG 19462 |||||||||| |||||||| |||||||| || || || || || ||||| ||||| |||| Sbjct 53387 AAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTATCTTCCAATACG 53328 Query 19463 CATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCA 19522 | || |||||||| ||||| || || ||||| | ||| |||||||| | || | Sbjct 53327 CTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGCCTGTAATGGGAA 53268 Query 19523 TTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTA 19582 | ||||| | || ||||| | || ||||| |||||| | || || || ||||| | Sbjct 53267 TCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGGATTCAACTTCA 53208 Query 19583 ACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATC 19642 ||||||| | | || || || ||||| || | || |||||||| ||| | || | Sbjct 53207 ACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTGATATTGTAAACC 53148 Query 19643 GTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700 |||||||||| || | || ||||||||||| ||||| ||||| |||||||||||||| Sbjct 53147 GTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGA 53090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141148764801018